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L3_098_332G1_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_335_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17..1021
DNA (1005bp) protein (335aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003747227
pyridoxal phosphate biosynthesis protein
L3_098_332G1_scaffold_335_2
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1312..1959
DNA (648bp) protein (216aa)
Probable transaldolase; EC=2.2.1.2;; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
Probable transaldolase n=3 Tax=Clostridium acetobutylicum RepID=TAL_CLOAB
putative translaldolase
L3_098_332G1_scaffold_335_3
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2708..3538
DNA (831bp) protein (277aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R6JZ85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63106.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Xylose isomerase domain-containing protein TIM barrel
L3_098_332G1_scaffold_335_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3550..4206
DNA (657bp) protein (219aa)
Asp/Glu racemase n=1 Tax=Clostridium bolteae 90B8 RepID=R0B7Y8_9CLOT
Asp/Glu racemase {ECO:0000313|EMBL:ENZ41094.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Asp/Glu racemase
L3_098_332G1_scaffold_335_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4231..5061
DNA (831bp) protein (277aa)
Transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZMP3_9CLOT
Transketolase {ECO:0000313|EMBL:KEZ91876.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
L3_098_332G1_scaffold_335_6
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5061..5993
DNA (933bp) protein (311aa)
transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase n=2 Tax=Clostridium bolteae RepID=N9ZIW4_9CLOT
Transketolase {ECO:0000313|EMBL:KEZ91877.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
L3_098_332G1_scaffold_335_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5999..6910
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK92_9CLOT
Xylose isomerase {ECO:0000313|EMBL:KEZ91878.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Xylose isomerase domain-containing protein TIM barrel
L3_098_332G1_scaffold_335_8
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6938..7840
DNA (903bp) protein (301aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUN6_9CLOT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EET87057.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
xylose isomerase
L3_098_332G1_scaffold_335_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7861..8817
DNA (957bp) protein (319aa)
hprA; glycerate dehydrogenase HprA (EC:1.1.1.29)
Glycerate dehydrogenase HprA {ECO:0000313|EMBL:AGF58746.1}; EC=1.1.1.29 {ECO:0000313|EMBL:AGF58746.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Glycerate dehydrogenase HprA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MVX3_9CLOT
L3_098_332G1_scaffold_335_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8955..10850
DNA (1896bp) protein (632aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S4D9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP12733.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
proprionate catabolism activator, Fis family
L3_098_332G1_scaffold_335_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10859..11716
DNA (858bp) protein (286aa)
Aldo/keto reductases related to diketogulonate reductase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVM7_9FIRM
Aldo/keto reductases related to diketogulonate reductase {ECO:0000313|EMBL:CDC15260.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Aldo/keto reductases, related to diketogulonate reductase
L3_098_332G1_scaffold_335_12
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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11737..12882
DNA (1146bp) protein (382aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MG11_9FIRM
Glycerate kinase {ECO:0000313|EMBL:EOS70019.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_098_332G1_scaffold_335_13
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12904..13710
DNA (807bp) protein (269aa)
Metal-dependent hydrolase of the beta-lactamase superfamily n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LKS5_ACEWD
beta-lactamase
Metal-dependent hydrolase of the beta-lactamase superfamily {ECO:0000313|EMBL:AFA50034.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_098_332G1_scaffold_335_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14212..15039
DNA (828bp) protein (276aa)
Pentapeptide repeat-containing protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EZY3_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:KIN80056.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
yybG; hypothetical protein
L3_098_332G1_scaffold_335_15
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

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15144..15935
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2XU70_9ENTE
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:KES17505.1}; TaxID=1445514 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola SCGC AB-598-I20.;"
Transcriptional regulators of sugar metabolism
L3_098_332G1_scaffold_335_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15982..16524
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLF3_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:AIY79908.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_098_332G1_scaffold_335_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16718..16870
DNA (153bp) protein (51aa)
GNAT family acetyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CIJ0_9CLOT
GNAT family acetyltransferase {ECO:0000313|EMBL:EOR26996.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
N-acetyltransferase GCN5
L3_098_332G1_scaffold_335_18
unknown

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comp(16815..17027)
DNA (213bp) protein (71aa)

This feature has no annotations

L3_098_332G1_scaffold_335_19
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17083..17274
DNA (192bp) protein (64aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3L316_CLOB6
GNAT family acetyltransferase {ECO:0000313|EMBL:KAJ52418.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
GNAT family acetyltransferase
L3_098_332G1_scaffold_335_20
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17537..17869
DNA (333bp) protein (111aa)
Cupin domain protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JSD9_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDE66513.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L3_098_332G1_scaffold_335_21
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17903..18310
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1I5_CLOB8
Uncharacterized protein {ECO:0000313|EMBL:KEZ86943.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_098_332G1_scaffold_335_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18322..18480
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10042.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_098_332G1_scaffold_335_23
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18550..19056
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42286.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
4Fe-4S binding domain.
L3_098_332G1_scaffold_335_24
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19333..20370
DNA (1038bp) protein (346aa)
Polysaccharide deacetylase n=1 Tax=Roseburia sp. CAG:45 RepID=R6P058_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDC11906.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
polysaccharide deacetylase
L3_098_332G1_scaffold_335_25
unknown

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20402..20536
DNA (135bp) protein (45aa)

This feature has no annotations

L3_098_332G1_scaffold_335_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20969..21820
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M0V3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF59195.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_332G1_scaffold_335_27
unknown

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comp(22270..22371)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_098_332G1_scaffold_335_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22375..23751)
DNA (1377bp) protein (459aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AW54_CLOBU
RND transporter MFP subunit {ECO:0000313|EMBL:KHD16302.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RND family efflux transporter, MFP subunit
L3_098_332G1_scaffold_335_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23779..24408)
DNA (630bp) protein (210aa)
Secretion protein HlyD n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IIP4_CLOBU
Secretion protein HlyD {ECO:0000313|EMBL:KHD16301.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
multidrug resistance efflux pump
L3_098_332G1_scaffold_335_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24435..26285)
DNA (1851bp) protein (617aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU41_CLOBU
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ36259.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type multidrug transport system, ATPase and permease components
Displaying items 1-30 of 50 in total

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