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L3_098_332G1_scaffold_407

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_407_1
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(108..1199)
DNA (1092bp) protein (364aa)
Integrase family protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQR3_CELLD
integrase
Integrase family protein {ECO:0000313|EMBL:ADZ82658.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_332G1_scaffold_407_2
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1606..2106)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD021 RepID=R8HT19_BACCE
Bacillus thuringiensis serovar morrisoni strain HD 600 BG10.Contig244, whole genome shotgun sequence {ECO:0000313|EMBL:KIP28474.1}; TaxID=1441 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. morrisoni.;"
phage protein
L3_098_332G1_scaffold_407_3
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2126..2500)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZN12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15403.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
transcriptional regulator, XRE family
L3_098_332G1_scaffold_407_4
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2838..3029
DNA (192bp) protein (64aa)
Bacillus thuringiensis serovar morrisoni strain HD 600 BG10.Contig244, whole genome shotgun sequence {ECO:0000313|EMBL:KIP25239.1}; TaxID=1441 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. morrisoni.;"
L3_098_332G1_scaffold_407_5
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3022..3282
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQR7_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82662.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_332G1_scaffold_407_6
Lactobacillus sp. WDC04, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3279..3623
DNA (345bp) protein (115aa)
ndoA2; mRNA interferase eNdoA (EC:3.1.-.-)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1335616 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus sp. WDC04.;"
mRNA interferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMA4_CLOPA
L3_098_332G1_scaffold_407_7
unknown

Not on your lists

3623..3721
DNA (99bp) protein (33aa)

This feature has no annotations

L3_098_332G1_scaffold_407_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3765..4676
DNA (912bp) protein (304aa)
Pentapeptide repeats family protein n=2 Tax=Clostridium difficile RepID=T3BMN6_CLODI
Pentapeptide repeats (8 copies).
Pentapeptide repeats (8 copies) {ECO:0000313|EMBL:CBK95339.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_332G1_scaffold_407_9
unknown

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4678..4803
DNA (126bp) protein (42aa)

This feature has no annotations

L3_098_332G1_scaffold_407_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4794..6020
DNA (1227bp) protein (409aa)
SNF2 family N-terminal domain protein n=2 Tax=Clostridium difficile RepID=T3M5B0_CLODI
Helicase SNF2 {ECO:0000313|EMBL:KIN81222.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
DNA/RNA helicase, superfamily II, SNF2 family
L3_098_332G1_scaffold_407_11

Not on your lists

6276..7325
DNA (1050bp) protein (350aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=91444 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L3_098_332G1_scaffold_407_12
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7345..8022
DNA (678bp) protein (226aa)
RNA polymerase sigma factor n=1 Tax=Streptomyces auratus AGR0001 RepID=J2JS22_9ACTO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1460244 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
sigma factor
L3_098_332G1_scaffold_407_13
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8103..8429
DNA (327bp) protein (109aa)
VRR-NUC domain-containing protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DG80_CLOTH
hypothetical protein
VRR-NUC domain-containing protein {ECO:0000313|EMBL:ABN52959.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_098_332G1_scaffold_407_14
Geomicrobium sp. JCM 19055, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8410..9228
DNA (819bp) protein (273aa)
antirepressor n=1 Tax=Lactococcus lactis RepID=UPI00034B8D7A
Phage antirepressor protein {ECO:0000313|EMBL:GAK01475.1}; TaxID=1460649 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19055.;"
Gp26 protein
L3_098_332G1_scaffold_407_15
unknown

Not on your lists

9230..9367
DNA (138bp) protein (46aa)

This feature has no annotations

L3_098_332G1_scaffold_407_16
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9357..10979
DNA (1623bp) protein (541aa)
Phage NTP-binding protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DG79_CLOTH
phage NTP-binding protein
Phage NTP-binding protein {ECO:0000313|EMBL:ABN52958.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_098_332G1_scaffold_407_17
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11067..11522
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IFZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB24741.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hypothetical protein
L3_098_332G1_scaffold_407_18
unknown

Not on your lists

11586..11783
DNA (198bp) protein (66aa)

This feature has no annotations

L3_098_332G1_scaffold_407_19
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11786..12154
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MP08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW24189.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
hypothetical protein
L3_098_332G1_scaffold_407_20
unknown

Not on your lists

12154..12399
DNA (246bp) protein (82aa)

This feature has no annotations

L3_098_332G1_scaffold_407_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12399..12674
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q8L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24065.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_332G1_scaffold_407_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12667..13353
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44308.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_098_332G1_scaffold_407_23
unknown

Not on your lists

13358..13540
DNA (183bp) protein (61aa)

This feature has no annotations

L3_098_332G1_scaffold_407_24
Prevotella loescheii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13745..14050
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Prevotella loescheii RepID=UPI00037F1C8E
Uncharacterized protein {ECO:0000313|EMBL:KDR51739.1}; TaxID=1122985 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930.;"
hypothetical protein
L3_098_332G1_scaffold_407_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14080..14253
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000373FD06
Uncharacterized protein {ECO:0000313|EMBL:BAO04834.1}; TaxID=1407017 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B str. Osaka05.;"
L3_098_332G1_scaffold_407_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14299..14535
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5F1_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03357.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_098_332G1_scaffold_407_27
unknown

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comp(14549..14698)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_098_332G1_scaffold_407_28

Not on your lists

14806..15219
DNA (414bp) protein (138aa)
Putative phage N-6-adenine-methyltransferase n=2 Tax=Clostridium botulinum RepID=M1ZZH0_CLOBO
DNA methyltransferase {ECO:0000313|EMBL:AJA42844.1}; TaxID=1567011 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406C.;"
DNA N-6-adenine-methyltransferase of bacteriophage
L3_098_332G1_scaffold_407_29
unknown

Not on your lists

15427..15624
DNA (198bp) protein (66aa)

This feature has no annotations

L3_098_332G1_scaffold_407_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15672..16637
DNA (966bp) protein (322aa)
Integrase family protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNB7_CELLD
integrase
Integrase family protein {ECO:0000313|EMBL:ADZ83571.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Displaying items 1-30 of 52 in total

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