ggKbase home page

L3_098_332G1_scaffold_1355

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_1355_1
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..139
DNA (138bp) protein (46aa)
UPI0003D656A4 related cluster n=1 Tax=unknown RepID=UPI0003D656A4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFL57092.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
L3_098_332G1_scaffold_1355_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

149..883
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein VEIDISOL_01604 n=3 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR5_9FIRM
Probable transcriptional regulatory protein VEIDISOL_01604 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
hypothetical protein
L3_098_332G1_scaffold_1355_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1091..1585
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR6_9FIRM
crossover junction endodeoxyribonuclease RuvC
L3_098_332G1_scaffold_1355_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1585..2193
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR7_9FIRM
Holliday junction DNA helicase RuvA
L3_098_332G1_scaffold_1355_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2196..3200
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR8_9FIRM
Holliday junction DNA helicase RuvB
L3_098_332G1_scaffold_1355_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3203..4807
DNA (1605bp) protein (535aa)
SpoIID/LytB domain protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR9_9FIRM
SpoIID/LytB domain protein {ECO:0000313|EMBL:EEP65064.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
SpoIID/LytB domain-containing protein
L3_098_332G1_scaffold_1355_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4819..5844
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FRS0_9FIRM
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L3_098_332G1_scaffold_1355_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5853..6968
DNA (1116bp) protein (372aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLM1_VEIPT
queuine tRNA-ribosyltransferase
L3_098_332G1_scaffold_1355_9
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7042..7332
DNA (291bp) protein (97aa)
Preprotein translocase, YajC subunit n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LG51_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EFR59240.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
preprotein translocase subunit YajC
L3_098_332G1_scaffold_1355_10
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7332..7898
DNA (567bp) protein (189aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D6938C related cluster n=1 Tax=unknown RepID=UPI0003D6938C
5-formyltetrahydrofolate cyclo-ligase
L3_098_332G1_scaffold_1355_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7920..9194
DNA (1275bp) protein (425aa)
Protein translocase subunit SecD n=3 Tax=Veillonella parvula RepID=T0T7B8_9FIRM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
protein-export membrane protein SecD
L3_098_332G1_scaffold_1355_12
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9191..10087
DNA (897bp) protein (299aa)
UPI0003D5CB9B related cluster n=1 Tax=unknown RepID=UPI0003D5CB9B
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
protein-export membrane protein SecF
L3_098_332G1_scaffold_1355_13
unknown

Not on your lists

10091..10225
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 13 items

View Taxonomy