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L3_101_000G1_scaffold_49

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_49_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(112..1026)
DNA (915bp) protein (305aa)
Elongation factor Ts n=3 Tax=Clostridiales RepID=H1C7J4_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tsf; elongation factor Ts
L3_101_000G1_scaffold_49_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1112..1840)
DNA (729bp) protein (243aa)
30S ribosomal protein S2 n=2 Tax=Clostridiales RepID=H1C7J5_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsB; 30S ribosomal protein S2
L3_101_000G1_scaffold_49_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2055..3248)
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35440.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_49_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3229..3729)
DNA (501bp) protein (167aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7J7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO35441.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_101_000G1_scaffold_49_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3858..4814)
DNA (957bp) protein (319aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hprK; HPr kinase/phosphorylase (EC:2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=3 Tax=Clostridiales RepID=G9YX56_9FIRM
L3_101_000G1_scaffold_49_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4994..5182
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=3 Tax=Clostridiales RepID=G9YX58_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
rpmB; 50S ribosomal protein L28
L3_101_000G1_scaffold_49_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5282..5758
DNA (477bp) protein (159aa)
Copper/zinc superoxide dismutase n=2 Tax=Clostridiales RepID=G9YX59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35444.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
superoxide dismutase copper/zinc binding protein
L3_101_000G1_scaffold_49_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5829..7859)
DNA (2031bp) protein (677aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35445.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative surface layer protein
L3_101_000G1_scaffold_49_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7878..9059)
DNA (1182bp) protein (394aa)
Efflux ABC transporter, permease protein n=2 Tax=Clostridiales RepID=U2DCG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55795.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative drug efflux ABC transporter permease protein
L3_101_000G1_scaffold_49_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9056..9787)
DNA (732bp) protein (244aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2D6X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55796.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative drug efflux ABC transporter ATP-binding protein
L3_101_000G1_scaffold_49_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9803..11596)
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35448.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative drug efflux protein
L3_101_000G1_scaffold_49_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11792..12469
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35449.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
response regulator receiver
L3_101_000G1_scaffold_49_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12466..13722
DNA (1257bp) protein (419aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dltS; sensor protein DltS (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7K6_9FIRM
L3_101_000G1_scaffold_49_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13801..14196
DNA (396bp) protein (132aa)
Thioesterase family protein n=2 Tax=Clostridiales RepID=G9YX66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35451.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Thioesterase superfamily
L3_101_000G1_scaffold_49_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14198..14671
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35452.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_49_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14749..15336
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35453.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_49_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15454..16209
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35454.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator, LuxR family
L3_101_000G1_scaffold_49_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16213..16440
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35455.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_49_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16434..17399
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35456.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_49_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17452..18117)
DNA (666bp) protein (222aa)
Radical SAM-linked protein n=3 Tax=Clostridiales RepID=G9YX71_9FIRM
Radical SAM-linked protein {ECO:0000313|EMBL:EHO35457.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_49_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18104..19945)
DNA (1842bp) protein (614aa)
Radical SAM domain protein n=3 Tax=Clostridiales RepID=G9YX72_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EHM37910.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
radical SAM protein
L3_101_000G1_scaffold_49_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20062..21276)
DNA (1215bp) protein (405aa)
Citrate transporter n=2 Tax=Clostridiales RepID=U2D6R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35459.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transporter, YbiR family
L3_101_000G1_scaffold_49_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21335..21541)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YX75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI77158.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000G1_scaffold_49_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21806..22570
DNA (765bp) protein (255aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YX77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35461.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
helix-turn-helix domain-containing protein
L3_101_000G1_scaffold_49_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22731..24494
DNA (1764bp) protein (588aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35462.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_49_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24524..25240)
DNA (717bp) protein (239aa)
Endopeptidase Clp n=3 Tax=Clostridiales RepID=G9YX79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35463.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
S14 family peptidase
L3_101_000G1_scaffold_49_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25319..26707)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35464.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_49_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26715..27194)
DNA (480bp) protein (160aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7M1_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO35465.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_101_000G1_scaffold_49_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27300..27653)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BGB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77164.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Sporulation initiation factor Spo0A C terminal.
L3_101_000G1_scaffold_49_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27669..27944)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35467.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 163 in total

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