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L3_101_000G1_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_75_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(716..1099)
DNA (384bp) protein (128aa)
general stress protein n=1 Tax=Lactobacillus rhamnosus RepID=UPI00036DC3B1
yugI; General stress protein 13
General stress protein {ECO:0000313|EMBL:KIC97510.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_101_000G1_scaffold_75_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1163..1747)
DNA (585bp) protein (195aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Peptidyl-prolyl cis-trans isomerase n=6 Tax=Lactobacillus rhamnosus RepID=C7THF9_LACRL
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_101_000G1_scaffold_75_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1982..2968
DNA (987bp) protein (329aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Ferredoxin--NADP reductase n=7 Tax=Lactobacillus RepID=C7THF8_LACRL
yumC; ferredoxin--NADP reductase 2
L3_101_000G1_scaffold_75_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3063..3566
DNA (504bp) protein (168aa)
Phosphatidylglycerophosphatase A related protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QMR9_LACRH
ltrC; low temperature requirement C protein
Low temperature requirement C protein {ECO:0000313|EMBL:AGP73485.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3652..4305
DNA (654bp) protein (218aa)
Uncharacterized membrane-associated protein n=6 Tax=Lactobacillus rhamnosus RepID=B5QMR8_LACRH
dedA; hypothetical protein
DedA {ECO:0000313|EMBL:CAR86703.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41311.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_101_000G1_scaffold_75_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4366..4998)
DNA (633bp) protein (211aa)
Integral membrane protein, Rhodopsin-like GPCR superfamily n=4 Tax=Lactobacillus rhamnosus RepID=C7THF5_LACRL
integral membrane protein, Rhodopsin-like GPCR superfamily
Membrane protein {ECO:0000313|EMBL:KIC97515.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_101_000G1_scaffold_75_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4999..5775)
DNA (777bp) protein (259aa)
Hydrolase of the HAD superfamily n=10 Tax=Lactobacillus rhamnosus RepID=C7TAQ8_LACRG
nagD; HAD superfamily hydrolase
Putative NagD-like phosphatase {ECO:0000313|EMBL:EKS49544.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_101_000G1_scaffold_75_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5784..6440)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2K1Q6_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EEN78777.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L3_101_000G1_scaffold_75_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6495..7871)
DNA (1377bp) protein (459aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase n=3 Tax=Lactobacillus rhamnosus RepID=C7THF2_LACRL
yunD; 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like esterase
5'-nucleotidase family protein in cluster with NagD-like phosphatase {ECO:0000313|EMBL:AGP73480.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7984..8586)
DNA (603bp) protein (201aa)
Predicted phosphoesterase or phosphohydrolase n=10 Tax=Lactobacillus rhamnosus RepID=B5QMR3_LACRH
phosphoesterase-like protein
Phosphoesterase {ECO:0000313|EMBL:AGP73479.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8588..9325)
DNA (738bp) protein (246aa)
Predicted multitransmembrane protein n=8 Tax=Lactobacillus rhamnosus RepID=B5QMR2_LACRH
hypothetical protein
Putative multitransmembrane protein {ECO:0000313|EMBL:EKS49540.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_101_000G1_scaffold_75_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9322..10389)
DNA (1068bp) protein (356aa)
Conserved membrane protein n=6 Tax=Lactobacillus rhamnosus RepID=C7THE9_LACRL
membrane protein
Membrane protein {ECO:0000313|EMBL:AGP73477.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10591..10905)
DNA (315bp) protein (105aa)
Uncharacterized protein n=13 Tax=Lactobacillus rhamnosus RepID=C8USE9_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73476.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11016..12356
DNA (1341bp) protein (447aa)
Glycerophosphoryl diester phosphodiesterase n=3 Tax=Lactobacillus rhamnosus RepID=C7THE7_LACRL
Glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AGP73475.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12492..13895
DNA (1404bp) protein (468aa)
Dipeptidase n=5 Tax=Lactobacillus rhamnosus RepID=C7THE6_LACRL
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-related deacylase
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-related deacylase {ECO:0000313|EMBL:AGP73474.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14038..14787
DNA (750bp) protein (250aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EEN78769.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EEN78769.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Biotin operon repressor n=4 Tax=Lactobacillus rhamnosus RepID=C7THE5_LACRL
biotin--[acetyl-CoA-carboxylase] ligase
L3_101_000G1_scaffold_75_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14804..15487)
DNA (684bp) protein (228aa)
Hydrolase, haloacid dehalogenase-like family n=5 Tax=Lactobacillus RepID=C7THE4_LACRL
yfnB; putative HAD-hydrolase yfnB
5'-nucleotidase YjjG {ECO:0000313|EMBL:AGP73472.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16112..18856
DNA (2745bp) protein (915aa)
Membrane carboxypeptidase, penicillin-binding protein 1B n=4 Tax=Lactobacillus rhamnosus RepID=C7THE3_LACRL
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:AGP73470.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
transglycosylase
L3_101_000G1_scaffold_75_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19018..20019)
DNA (1002bp) protein (334aa)
Catabolite control protein A n=13 Tax=Lactobacillus rhamnosus RepID=B5QMS5_LACRH
ccpA; catabolite control protein A
Catabolite control protein A {ECO:0000313|EMBL:KIC97528.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_101_000G1_scaffold_75_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20374..21477
DNA (1104bp) protein (368aa)
Proline dipeptidase n=6 Tax=Lactobacillus rhamnosus RepID=B5QMS4_LACRH
pepQ; Xaa-Pro dipeptidase
Dipeptidase {ECO:0000313|EMBL:KIC97529.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_101_000G1_scaffold_75_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21631..22164)
DNA (534bp) protein (178aa)
Transcriptional regulator n=6 Tax=Lactobacillus rhamnosus RepID=C7THE0_LACRL
HTH domain protein
Transcriptional repressor for NAD biosynthesis in gram-positives {ECO:0000313|EMBL:AGP73467.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22303..22803)
DNA (501bp) protein (167aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7THD9_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC97531.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_101_000G1_scaffold_75_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22818..23246)
DNA (429bp) protein (143aa)
General stress protein n=8 Tax=Lactobacillus rhamnosus RepID=S4ZW04_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN78785.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_101_000G1_scaffold_75_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23568..23933
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2GGU5_LACRH
Uncharacterized protein {ECO:0000313|EMBL:KIC97128.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
hypothetical protein
L3_101_000G1_scaffold_75_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23978..24862
DNA (885bp) protein (295aa)
Small-conductance mechanosensitive channel n=5 Tax=Lactobacillus rhamnosus RepID=C7THD7_LACRL
small-conductance mechanosensitive channel
Potassium efflux system KefA protein/Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AGP73462.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24914..25816
DNA (903bp) protein (301aa)
Conserved membrane protein n=5 Tax=Lactobacillus rhamnosus RepID=C7THD6_LACRL
membrane protein
Membrane protein {ECO:0000313|EMBL:AGP73461.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25868..26353)
DNA (486bp) protein (162aa)
CBS domain-containing protein ykuL n=4 Tax=Lactobacillus rhamnosus RepID=G7V4T1_LACRH
ykuL; CBS domain-containing protein ykuL
CBS domain containing protein {ECO:0000313|EMBL:AGP73460.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26641..27372
DNA (732bp) protein (244aa)
Glycerol uptake facilitator protein n=7 Tax=Lactobacillus rhamnosus RepID=C7THD4_LACRL
Glycerol uptake facilitator protein
Glycerol uptake facilitator protein {ECO:0000313|EMBL:AGP73459.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_101_000G1_scaffold_75_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27465..27989)
DNA (525bp) protein (175aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Phosphoesterase n=5 Tax=Lactobacillus rhamnosus RepID=C7THD3_LACRL
phosphodiesterase
L3_101_000G1_scaffold_75_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(27986..29440)
DNA (1455bp) protein (485aa)
Glutamate racemase {ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.- {ECO:0000256|SAAS:SAAS00274607};; EC=5.1.1.3 {ECO:0000256|SAAS:SAAS00041166};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Glutamate racemase n=6 Tax=Lactobacillus RepID=C7THD2_LACRL
rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Displaying items 1-30 of 120 in total

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