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L3_101_000G1_scaffold_196

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Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_196_1
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..273
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RX62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74278.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
HTH domain.
L3_101_000G1_scaffold_196_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

292..870
DNA (579bp) protein (193aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL55_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEA83243.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Site-specific recombinase XerD
L3_101_000G1_scaffold_196_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1032..1877
DNA (846bp) protein (282aa)
MerR family transcriptional regulator n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031C7E48
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL21794.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_101_000G1_scaffold_196_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1874..2569
DNA (696bp) protein (232aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVZ2_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL21795.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_101_000G1_scaffold_196_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2573..3757
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21796.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_101_000G1_scaffold_196_6
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4119..5180
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q406_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL24894.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
L3_101_000G1_scaffold_196_7
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5716..6021
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J6B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26707.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_101_000G1_scaffold_196_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6045..6584
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Clostridium difficile RepID=UPI0003604448
Uncharacterized protein {ECO:0000313|EMBL:EEA80133.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_101_000G1_scaffold_196_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6617..6937
DNA (321bp) protein (107aa)
Regulator of competence-specific genes n=2 Tax=Ruminococcaceae RepID=D4L9C4_9FIRM
Regulator of competence-specific genes
Regulator of competence-specific genes {ECO:0000313|EMBL:CBL16219.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_101_000G1_scaffold_196_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7024..7368
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2E7K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90302.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_101_000G1_scaffold_196_11
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7432..7674
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZLL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64804.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_101_000G1_scaffold_196_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7713..7877
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70482.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
bifunctional deaminase-reductase domain-containing protein
L3_101_000G1_scaffold_196_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7874..8290
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C858_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35239.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
bifunctional deaminase-reductase domain-containing protein
L3_101_000G1_scaffold_196_14
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8653..9066
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85728.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
N-acetyltransferase GCN5
L3_101_000G1_scaffold_196_15
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9498..9809
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=S2YW61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD56024.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_101_000G1_scaffold_196_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9811..10017
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RX46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85724.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Predicted transcriptional regulators
L3_101_000G1_scaffold_196_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10174..11532)
DNA (1359bp) protein (453aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RX45_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EGC74261.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
brnQ; branched-chain amino acid transport system II carrier protein
L3_101_000G1_scaffold_196_18
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12044..12784
DNA (741bp) protein (247aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RX33_9FIRM
L3_101_000G1_scaffold_196_19
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12878..15019)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RX32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74248.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
putative ABC transporter permease protein
L3_101_000G1_scaffold_196_20
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15003..15776)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RX31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74247.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
putative ABC transporter ATP-binding protein
L3_101_000G1_scaffold_196_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16068..16415)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N801_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF40607.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_101_000G1_scaffold_196_22
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16432..17709)
DNA (1278bp) protein (426aa)
Di-and tricarboxylate transporters n=1 Tax=Clostridium sp. CAG:58 RepID=R6S4L7_9CLOT
Di-and tricarboxylate transporters {ECO:0000313|EMBL:CDC50281.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Di-and tricarboxylate transporters
L3_101_000G1_scaffold_196_23
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18021..19094)
DNA (1074bp) protein (358aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MSX7_9FIRM
L3_101_000G1_scaffold_196_24
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19121..20029)
DNA (909bp) protein (303aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. M62/1 RepID=D4CDN2_9CLOT
L3_101_000G1_scaffold_196_25
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20104..21267)
DNA (1164bp) protein (388aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EFE12246.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EFE12246.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Alcohol dehydrogenase, class IV n=3 Tax=Clostridiales RepID=D4MSX5_9FIRM
Alcohol dehydrogenase, class IV
L3_101_000G1_scaffold_196_26
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21388..22548)
DNA (1161bp) protein (387aa)
Predicted neuraminidase (Sialidase) n=3 Tax=Clostridium RepID=D6DH16_CLOSC
Predicted neuraminidase (sialidase)
Predicted neuraminidase (Sialidase) {ECO:0000313|EMBL:CCY83541.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_101_000G1_scaffold_196_27
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22545..23801)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5LWB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY83540.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_101_000G1_scaffold_196_28
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24053..25852
DNA (1800bp) protein (600aa)
Transcriptional regulator, Fis family n=1 Tax=Clostridium sp. M62/1 RepID=D4CDM7_9CLOT
Transcriptional regulator, Fis family {ECO:0000313|EMBL:EFE12243.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L3_101_000G1_scaffold_196_29
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25886..26599
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RX30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74246.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
putative two-component response regulator
L3_101_000G1_scaffold_196_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26596..27900
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XTZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85711.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
putative two-component histidine kinase
Displaying items 1-30 of 81 in total

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