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L3_101_000G1_scaffold_230

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_230_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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269..1459
DNA (1191bp) protein (397aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
Phosphoglycerate kinase n=53 Tax=Lactobacillus casei group RepID=PGK_LACC3
L3_101_000G1_scaffold_230_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1534..2289
DNA (756bp) protein (252aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Triosephosphate isomerase n=53 Tax=Lactobacillus casei group RepID=TPIS_LACC3
tpiA; phosphoglycerate kinase
L3_101_000G1_scaffold_230_3
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2338..3642
DNA (1305bp) protein (435aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Enolase n=4 Tax=Lactobacillus casei group RepID=K6RM47_LACCA
enolase
L3_101_000G1_scaffold_230_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3972..5234
DNA (1263bp) protein (421aa)
Major facilitator superfamily permease n=14 Tax=Lactobacillus casei group RepID=K6RE84_LACCA
Permease of the major facilitator superfamily protein {ECO:0000313|EMBL:GAN36493.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
major facilitator superfamily permease
L3_101_000G1_scaffold_230_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5294..5596
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei RepID=K6QXM0_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAN36494.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_101_000G1_scaffold_230_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5685..7256
DNA (1572bp) protein (524aa)
Chloride channel protein EriC n=36 Tax=Lactobacillus casei group RepID=C5F4T2_LACPA
Chloride channel protein EriC {ECO:0000313|EMBL:EPC88655.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Voltage-gated chloride channel family protein
L3_101_000G1_scaffold_230_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7442..7678
DNA (237bp) protein (79aa)
Preprotein translocase, SecG subunit n=54 Tax=Lactobacillus casei group RepID=B3WCX1_LACCB
Preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:BAN71209.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L3_101_000G1_scaffold_230_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7923..8657
DNA (735bp) protein (245aa)
Carboxylesterase n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2N0P0_LACPA
Esterase {ECO:0000313|EMBL:EPD08934.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
esterase
L3_101_000G1_scaffold_230_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8659..11028
DNA (2370bp) protein (790aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
Ribonuclease R n=23 Tax=Lactobacillus casei group RepID=C5F4T7_LACPA
RNase II family exoribonuclease R
L3_101_000G1_scaffold_230_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11060..11533
DNA (474bp) protein (158aa)
SsrA-binding protein n=53 Tax=Lactobacillus casei group RepID=SSRP_LACC3
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_101_000G1_scaffold_230_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11841..12794
DNA (954bp) protein (318aa)
Transcriptional regulator n=9 Tax=Lactobacillus casei group RepID=S6BIL3_LACPA
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EPC33080.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
LacI family transcriptional repressor
L3_101_000G1_scaffold_230_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12998..14674
DNA (1677bp) protein (559aa)
oligo-1,6-glucosidase (EC:3.2.1.10)
Alpha-glucosidase n=2 Tax=Lactobacillus casei group RepID=S2RJD9_LACPA
Alpha-glucosidase {ECO:0000313|EMBL:EPC67428.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L3_101_000G1_scaffold_230_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14671..16416
DNA (1746bp) protein (582aa)
Neopullulanase {ECO:0000313|EMBL:EKQ11059.1}; EC=3.2.1.- {ECO:0000313|EMBL:EKQ11059.1};; EC=3.2.1.135 {ECO:0000313|EMBL:EKQ11059.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Neopullulanase n=17 Tax=Lactobacillus casei group RepID=D8GFB4_LACCZ
Neopullulanase
L3_101_000G1_scaffold_230_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16546..18807
DNA (2262bp) protein (754aa)
Maltosephosphorylase n=6 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6BIL8_LACPA
Glycosyl hydrolase family 65 central catalytic domain protein {ECO:0000313|EMBL:EEI66933.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
maltose phosphorylase
L3_101_000G1_scaffold_230_15
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18800..19492
DNA (693bp) protein (231aa)
Beta-phosphoglucomutase {ECO:0000313|EMBL:ERN48509.1}; EC=5.4.2.6 {ECO:0000313|EMBL:ERN48509.1};; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Beta-phosphoglucomutase n=2 Tax=Lactobacillus casei RepID=K6SVN1_LACCA
HAD family sugar phosphatase
L3_101_000G1_scaffold_230_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19497..20627
DNA (1131bp) protein (377aa)
ATP-binding component of an ABC superfamily sugar transporter n=2 Tax=Lactobacillus casei RepID=K6S501_LACCA
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERN48510.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
ABC transporter
L3_101_000G1_scaffold_230_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20655..22280
DNA (1626bp) protein (542aa)
Glucan 1,6-alpha-glucosidase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp230 RepID=S2LL81_LACPA
Glucan 1,6-alpha-glucosidase {ECO:0000313|EMBL:AGP67834.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
Glucan 1,6-alpha-glucosidase
L3_101_000G1_scaffold_230_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22320..23552
DNA (1233bp) protein (411aa)
Maltose ABC transporter, maltose-binding protein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2LIC3_LACPA
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE {ECO:0000313|EMBL:AGP67835.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L3_101_000G1_scaffold_230_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23622..24980
DNA (1359bp) protein (453aa)
Permease component of an ABC superfamily maltose/maltodextrin transporter n=2 Tax=Lactobacillus casei RepID=K6SUQ7_LACCA
Maltose ABC transporter permease protein {ECO:0000313|EMBL:GAN41822.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
Maltose/maltodextrin ABC transporter, permease protein MalF
L3_101_000G1_scaffold_230_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24986..25843
DNA (858bp) protein (286aa)
Maltose ABC transporter inner membrane component n=15 Tax=Lactobacillus casei group RepID=C5F4U9_LACPA
Maltose/maltodextrin ABC transporter, permease protein MalG
Maltose ABC transporter permease {ECO:0000313|EMBL:EPC92447.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_101_000G1_scaffold_230_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26319..26621
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei RepID=K6S505_LACCA
Uncharacterized protein {ECO:0000313|EMBL:ERN48512.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Hypothetical protein
L3_101_000G1_scaffold_230_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26611..26799
DNA (189bp) protein (63aa)
DNA-binding helix-turn-helix protein n=13 Tax=Lactobacillus casei group RepID=C2FGW8_LACPA
DNA-binding protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI66929.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_101_000G1_scaffold_230_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27193..28434)
DNA (1242bp) protein (414aa)
Metallo-beta-lactamase domain protein n=12 Tax=Lactobacillus paracasei subsp. paracasei RepID=C2FGW6_LACPA
metallo-beta-lactamase
Uncharacterized protein {ECO:0000313|EMBL:EPC63662.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L3_101_000G1_scaffold_230_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28563..29876)
DNA (1314bp) protein (438aa)
ABC-type sugar transport system n=38 Tax=Lactobacillus casei group RepID=C5F4V4_LACPA
ABC transporter substrate-binding protein
Periplasmic-binding component of an ABC superfamily glycerol-3-phosphate transporter {ECO:0000313|EMBL:EKQ03686.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_101_000G1_scaffold_230_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29886..30707)
DNA (822bp) protein (274aa)
ABC-type maltose transport system n=46 Tax=Lactobacillus casei group RepID=C5F4V5_LACPA
sugar ABC transporter permease
Permease component of an ABC superfamily maltose transporter {ECO:0000313|EMBL:EKQ11066.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_101_000G1_scaffold_230_26
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30723..31616)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component n=48 Tax=Lactobacillus casei group RepID=B3WCZ0_LACCB
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:ERN48517.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_101_000G1_scaffold_230_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31606..32667)
DNA (1062bp) protein (354aa)
ABC-type sugar transport system, ATPase component n=25 Tax=Lactobacillus casei group RepID=D8GFC8_LACCZ
sugar ABC transporter ATPase
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:EPC92440.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_101_000G1_scaffold_230_28
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32926..33633
DNA (708bp) protein (236aa)
Acetyltransferase, GNAT family n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2MR53_LACPA
GNAT family acetyltransferase {ECO:0000313|EMBL:ABP57787.1}; TaxID=1582 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei.;"
Acetyltransferase
L3_101_000G1_scaffold_230_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33944..34450)
DNA (507bp) protein (169aa)
YxjI n=53 Tax=Lactobacillus casei group RepID=B3WCZ3_LACCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC92438.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_101_000G1_scaffold_230_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34663..35556)
DNA (894bp) protein (298aa)
YcsE protein n=42 Tax=Lactobacillus casei group RepID=B3WCZ4_LACCB
hypothetical protein
Putative phosphatase YwpJ {ECO:0000313|EMBL:EPC88674.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Displaying items 1-30 of 73 in total

View Taxonomy