ggKbase home page

L3_101_000G1_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_240_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..479)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26470.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF1266).
L3_101_000G1_scaffold_240_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(512..1498)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26471.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF3137).
L3_101_000G1_scaffold_240_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1519..2262)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26472.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_240_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2601..3059)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75636.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_101_000G1_scaffold_240_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3145..3621)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26439.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_240_6
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4182..4583)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62769.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_101_000G1_scaffold_240_7
Clostridium sp. CAG:465, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4851..5192)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:465 RepID=R6U8K7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC78409.1}; TaxID=1262811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:465.;"
L3_101_000G1_scaffold_240_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5469..6848)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CN14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO18851.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function DUF88.
L3_101_000G1_scaffold_240_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7091..7975)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77745.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000G1_scaffold_240_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8010..8432)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32288.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_240_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8450..9433)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32287.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_240_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9533..10426)
DNA (894bp) protein (298aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=U2D8F9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI77742.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000G1_scaffold_240_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10710..10979
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO19114.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator, XRE family
L3_101_000G1_scaffold_240_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11100..11360
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BI17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77739.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000G1_scaffold_240_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11721..12080
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=U2D8F5_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI77737.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Helix-turn-helix.
L3_101_000G1_scaffold_240_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12136..12456
DNA (321bp) protein (107aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DE03_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI77736.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
XRE family transcriptional regulator
L3_101_000G1_scaffold_240_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13054..13575
DNA (522bp) protein (174aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Clostridiales RepID=U2C120_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO19111.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase ECF-type sigma factor
L3_101_000G1_scaffold_240_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14171..14704
DNA (534bp) protein (178aa)
Toxin-antitoxin system, toxin component, MazF family n=2 Tax=Clostridiales RepID=U2DDZ8_9CLOT
Toxin-antitoxin system, toxin component, MazF family {ECO:0000313|EMBL:ERI77731.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Growth inhibitor
L3_101_000G1_scaffold_240_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14701..14904
DNA (204bp) protein (68aa)
Excisionase family DNA binding domain-containing protein n=2 Tax=Clostridiales RepID=H1CKZ7_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERI77730.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
excisionase
L3_101_000G1_scaffold_240_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14992..16179
DNA (1188bp) protein (396aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BI09_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI77729.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinase XerD
L3_101_000G1_scaffold_240_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16553..16810
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34693.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_240_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16807..17124
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DD93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34692.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative conjugative transposon proteinTn916-like, CTn7-Orf8
L3_101_000G1_scaffold_240_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17271..20033
DNA (2763bp) protein (921aa)
Magnesium-translocating P-type ATPase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA51_9FIRM
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EHO34691.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
magnesium-translocating P-type ATPase
L3_101_000G1_scaffold_240_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20055..20225
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YM56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI77499.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
conjugative transposon protein
L3_101_000G1_scaffold_240_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20229..20411
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34689.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_240_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20572..22392)
DNA (1821bp) protein (607aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34688.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transport system ATP-binding and permease protein
L3_101_000G1_scaffold_240_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22395..24122)
DNA (1728bp) protein (576aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34687.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transport system ATP-binding and permease protein
L3_101_000G1_scaffold_240_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24226..25053
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34686.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
multidrug-efflux transporter 2 regulator
L3_101_000G1_scaffold_240_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25231..26436
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34685.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
flavodoxin/nitric oxide synthase
L3_101_000G1_scaffold_240_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26493..27230)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34684.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 85 in total

View Taxonomy