ggKbase home page

L3_101_000G1_scaffold_380

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_380_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(192..1586)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2B4X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67265.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_101_000G1_scaffold_380_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1773..2264
DNA (492bp) protein (164aa)
Sigma-70 region 2 n=3 Tax=Clostridiales RepID=G9YUQ1_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO34968.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase subunit sigma-24
L3_101_000G1_scaffold_380_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2236..2892
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2CDE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34967.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_380_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3135..4151)
DNA (1017bp) protein (339aa)
Stage II sporulation protein D n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C993_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:EHO34966.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spoIID; stage II sporulation protein D
L3_101_000G1_scaffold_380_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4294..5661
DNA (1368bp) protein (456aa)
Citrate synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C992_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Citrate synthase
L3_101_000G1_scaffold_380_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5665..6255
DNA (591bp) protein (197aa)
Putative dihydroxyacetone kinase regulator n=3 Tax=Clostridiales RepID=G9YQ23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34964.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TetR family transcriptional regulator
L3_101_000G1_scaffold_380_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6379..8154
DNA (1776bp) protein (592aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQ22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34963.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
myosin-crossreactive antigen
L3_101_000G1_scaffold_380_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8245..8961)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C989_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34962.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GCN5-related N-acetyltransferase
L3_101_000G1_scaffold_380_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8918..10096)
DNA (1179bp) protein (393aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YR78_9FIRM
histidine kinase
L3_101_000G1_scaffold_380_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10109..11152)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C987_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34960.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000G1_scaffold_380_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11168..11650)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C6U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34959.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_380_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12167..12715
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34958.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
collagen triple helix repeat-containing protein
L3_101_000G1_scaffold_380_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12842..13537
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=U2DJA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34957.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_101_000G1_scaffold_380_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14186..15388)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C923_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34896.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ethanolamine utilization protein
L3_101_000G1_scaffold_380_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15408..16373)
DNA (966bp) protein (322aa)
Choline/ethanolamine kinase n=2 Tax=Clostridiales RepID=G9YR72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34895.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
choline kinase
L3_101_000G1_scaffold_380_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16659..17504
DNA (846bp) protein (282aa)
Transcriptional regulator, MerR family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR69_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EHM49951.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_101_000G1_scaffold_380_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17628..18587)
DNA (960bp) protein (320aa)
Agmatinase n=2 Tax=Clostridiales RepID=H1C920_9FIRM
Agmatinase {ECO:0000313|EMBL:EHO34893.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
agmatinase
L3_101_000G1_scaffold_380_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18824..19939)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C919_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34892.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
4-hydroxybutyrate dehydrogenase
L3_101_000G1_scaffold_380_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19972..21669)
DNA (1698bp) protein (566aa)
Thiamine pyrophosphate enzyme, central domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ94_9FIRM
Thiamine pyrophosphate enzyme, central domain protein {ECO:0000313|EMBL:EHM51686.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
acetolactate synthase large subunit
L3_101_000G1_scaffold_380_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21739..23223)
DNA (1485bp) protein (495aa)
Transporter, SSS family n=2 Tax=Clostridiales RepID=G9YQ95_9FIRM
Transporter, SSS family {ECO:0000313|EMBL:ERI81591.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
PutP; Na+/proline, Na+/panthothenate symporter
L3_101_000G1_scaffold_380_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23312..24061)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C914_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34887.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
short chain dehydrogenase
L3_101_000G1_scaffold_380_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24407..25042
DNA (636bp) protein (212aa)
Sigma-54 interaction domain protein n=3 Tax=Clostridiales RepID=G9YQ98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34886.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
sigma-54 factor interaction domain-containing protein
L3_101_000G1_scaffold_380_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25106..26428
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C912_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34885.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Fis family transcriptional regulator
L3_101_000G1_scaffold_380_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26513..26989)
DNA (477bp) protein (159aa)
Toxin secretion/phage lysis holin n=2 Tax=Clostridiales RepID=G9YQ99_9FIRM
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EHM51691.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
toxin secretion/phage lysis holin
L3_101_000G1_scaffold_380_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26989..27654)
DNA (666bp) protein (222aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax=Clostridiales RepID=G9YQA0_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ERI81585.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
L3_101_000G1_scaffold_380_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27740..28399)
DNA (660bp) protein (220aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34882.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_101_000G1_scaffold_380_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28377..29510)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=G9YQA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM51694.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_101_000G1_scaffold_380_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29524..29817)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM51695.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_101_000G1_scaffold_380_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30249..30965
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C905_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34996.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator, Crp/Fnr family
L3_101_000G1_scaffold_380_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30979..32481
DNA (1503bp) protein (501aa)
YjjI family glycine radical enzyme n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C904_9FIRM
YjjI family glycine radical enzyme {ECO:0000313|EMBL:EHO34995.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 53 in total

View Taxonomy