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L3_101_000G1_scaffold_386

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_386_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16..444
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BHL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR38149.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_101_000G1_scaffold_386_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

896..1204
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1AVF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO19962.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_101_000G1_scaffold_386_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1290..1622
DNA (333bp) protein (111aa)
DNA-binding helix-turn-helix protein n=3 Tax=Firmicutes RepID=E4LSH5_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFR38178.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_101_000G1_scaffold_386_4
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2033..2224
DNA (192bp) protein (64aa)
DNA-binding helix-turn-helix protein n=7 Tax=Firmicutes RepID=E4LSH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX68046.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
XRE family transcriptional regulator
L3_101_000G1_scaffold_386_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2235..2357
DNA (123bp) protein (41aa)
DNA-binding helix-turn-helix protein n=7 Tax=Firmicutes RepID=E4LSH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86597.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_101_000G1_scaffold_386_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2413..3036)
DNA (624bp) protein (208aa)
Acetyltransferase, GNAT family n=2 Tax=Firmicutes RepID=E4LSH7_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR38166.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
N-acetyltransferase GCN5
L3_101_000G1_scaffold_386_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3087..4469)
DNA (1383bp) protein (461aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
asnC; asparaginyl-tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UZF5_9FIRM
L3_101_000G1_scaffold_386_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4486..4659)
DNA (174bp) protein (58aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VKV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85465.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_101_000G1_scaffold_386_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4714..5343)
DNA (630bp) protein (210aa)
Redox-sensing transcriptional repressor Rex n=6 Tax=Firmicutes RepID=G1VKV5_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
AT-rich DNA-binding protein
L3_101_000G1_scaffold_386_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5667..5843)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NZQ7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ60681.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_101_000G1_scaffold_386_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5850..6266)
DNA (417bp) protein (139aa)
Acetyltransferase, GNAT family n=7 Tax=Firmicutes RepID=E4LSH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86591.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_101_000G1_scaffold_386_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6316..6507)
DNA (192bp) protein (64aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LSI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86590.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_101_000G1_scaffold_386_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6591..7319)
DNA (729bp) protein (243aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
dapG; aspartate kinase I (EC:2.7.2.4)
Aspartokinase n=7 Tax=Firmicutes RepID=E4LSI1_9CLOT
L3_101_000G1_scaffold_386_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7515..8189)
DNA (675bp) protein (225aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Firmicutes RepID=E4LSI2_9CLOT
nanE; N-acetylmannosamine-6-phosphate 2-epimerase
L3_101_000G1_scaffold_386_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8406..8975)
DNA (570bp) protein (190aa)
Hydrolase, NUDIX family n=4 Tax=Firmicutes RepID=E4LSI3_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFR38195.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
NUDIX hydrolase
L3_101_000G1_scaffold_386_16
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8975..10357)
DNA (1383bp) protein (461aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BHK2_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EHO19950.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_101_000G1_scaffold_386_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10480..11403)
DNA (924bp) protein (308aa)
Cell division protein FtsX n=3 Tax=Firmicutes RepID=E4LSI6_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ftsX; cell division protein FtsX
L3_101_000G1_scaffold_386_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11665..12252)
DNA (588bp) protein (196aa)
BioY family protein n=5 Tax=Firmicutes RepID=E4LSI7_9CLOT
BioY family protein {ECO:0000313|EMBL:EQJ60670.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
BioY family protein
L3_101_000G1_scaffold_386_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12249..13202)
DNA (954bp) protein (318aa)
Biotin--[acetyl-CoA-carboxylase] ligase n=5 Tax=Firmicutes RepID=E4LSI8_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
birA; bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase
L3_101_000G1_scaffold_386_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13600..15150)
DNA (1551bp) protein (517aa)
Peptidase, M23 family n=4 Tax=Firmicutes RepID=E4LSI9_9CLOT
Peptidase, M23 family {ECO:0000313|EMBL:EFR38251.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
peptidase, M23B family
L3_101_000G1_scaffold_386_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15313..16209)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BHJ7_9FIRM
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ60665.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcriptional regulator
L3_101_000G1_scaffold_386_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16301..17080)
DNA (780bp) protein (260aa)
TIGR00245 family protein n=5 Tax=Firmicutes RepID=E4LSJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ60664.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_101_000G1_scaffold_386_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17073..17708)
DNA (636bp) protein (212aa)
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=E4LSJ3_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:EQJ60663.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC transporter
L3_101_000G1_scaffold_386_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17813..18688
DNA (876bp) protein (292aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1AVH3_9FIRM
EamA-like transporter family protein {ECO:0000313|EMBL:EQJ60662.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
membrane protein
L3_101_000G1_scaffold_386_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18788..18934
DNA (147bp) protein (49aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LSJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86568.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_101_000G1_scaffold_386_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19216..21051)
DNA (1836bp) protein (612aa)
Asparagine synthase {ECO:0000313|EMBL:EQJ60660.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EQJ60660.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Asparagine synthetase n=1 Tax=Clostridium difficile P28 RepID=T4NYS0_CLODI
asparagine synthetase
L3_101_000G1_scaffold_386_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21144..21968)
DNA (825bp) protein (275aa)
Radical SAM domain protein n=5 Tax=Firmicutes RepID=E4LSJ7_9CLOT
Radical SAM superfamily protein {ECO:0000313|EMBL:EQJ60659.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glutamate 5-kinase
L3_101_000G1_scaffold_386_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21952..23301)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LSJ8_9CLOT
Memo-like family protein {ECO:0000313|EMBL:EQJ60658.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_101_000G1_scaffold_386_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23589..24560)
DNA (972bp) protein (324aa)
Mbl protein n=7 Tax=Firmicutes RepID=E4LSJ9_9CLOT
Mbl protein {ECO:0000313|EMBL:EFR38101.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
rod shape-determining protein Mbl
L3_101_000G1_scaffold_386_30
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24563..24682)
DNA (120bp) protein (40aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LSK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86562.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Displaying items 1-30 of 72 in total

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