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L3_101_000G1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_406_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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279..1715
DNA (1437bp) protein (479aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridiales RepID=E4LWW7_9CLOT
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EQJ62653.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_101_000G1_scaffold_406_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1715..4645
DNA (2931bp) protein (977aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium difficile P28 RepID=T4P4Z7_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQJ62652.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
diguanylate kinase signaling protein
L3_101_000G1_scaffold_406_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4957..6744)
DNA (1788bp) protein (596aa)
DeoR-like helix-turn-helix domain protein n=1 Tax=Clostridium difficile P28 RepID=T4P4F7_CLODI
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:EQJ62650.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative transcriptional antiterminator
L3_101_000G1_scaffold_406_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6872..8470
DNA (1599bp) protein (533aa)
Transporter, major facilitator family protein n=2 Tax=Clostridiales RepID=E4LWX2_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFR36849.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
major facilitator superfamily
L3_101_000G1_scaffold_406_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8504..9985
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BB01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27038.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
amidohydrolase family protein
L3_101_000G1_scaffold_406_6
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10312..10620)
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LWX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27039.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_101_000G1_scaffold_406_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11093..11506
DNA (414bp) protein (138aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VU18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83498.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_101_000G1_scaffold_406_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11587..13269
DNA (1683bp) protein (561aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B2B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83500.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Glycosidases
L3_101_000G1_scaffold_406_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13438..14646)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B2B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83502.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_101_000G1_scaffold_406_10
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14643..15500)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B2B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83504.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_101_000G1_scaffold_406_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15487..16038)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR36885.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_101_000G1_scaffold_406_12
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16088..16414)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B2B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83577.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
transcriptional regulator, PadR family
L3_101_000G1_scaffold_406_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16439..16720)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B2B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83579.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_101_000G1_scaffold_406_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16720..17514)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B2B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83581.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Methyltransferase domain.
L3_101_000G1_scaffold_406_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18341..18454
DNA (114bp) protein (38aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LWY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83582.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
repressor protein
L3_101_000G1_scaffold_406_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18474..18749
DNA (276bp) protein (92aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VU11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84826.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
transcriptional regulator
L3_101_000G1_scaffold_406_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18759..19091
DNA (333bp) protein (111aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LWY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83586.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_101_000G1_scaffold_406_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19373..20185)
DNA (813bp) protein (271aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LWY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36784.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_101_000G1_scaffold_406_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20406..20771)
DNA (366bp) protein (122aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LWZ0_9CLOT
Description family protein {ECO:0000313|EMBL:EQJ62631.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_101_000G1_scaffold_406_20
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20933..21352)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B2C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83591.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_101_000G1_scaffold_406_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21392..21919)
DNA (528bp) protein (176aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B2C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83593.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
acetyltransferase
L3_101_000G1_scaffold_406_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22285..23418
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B2C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83594.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_101_000G1_scaffold_406_23
unknown

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23618..23941
DNA (324bp) protein (108aa)

This feature has no annotations

L3_101_000G1_scaffold_406_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24062..24820)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1BB19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27056.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
inositol monophosphatase family protein
L3_101_000G1_scaffold_406_25
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24805..25626)
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1B2C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27057.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
phosphoesterase
L3_101_000G1_scaffold_406_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25623..26324)
DNA (702bp) protein (234aa)
Phosphonate C-P lyase system protein PhnL n=7 Tax=Firmicutes RepID=E4LWZ6_9CLOT
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENY84814.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ABC-type phosphonate transport system, ATPase component
L3_101_000G1_scaffold_406_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26330..26971)
DNA (642bp) protein (214aa)
Transferase hexapeptide repeat family phosphonate metabolim protein n=5 Tax=Firmicutes RepID=H1B2D0_9FIRM
Transferase hexapeptide repeat family phosphonate metabolim protein {ECO:0000313|EMBL:CDC83599.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphonate metabolim protein, transferase hexapeptide repeat family
L3_101_000G1_scaffold_406_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26941..28110)
DNA (1170bp) protein (390aa)
Phosphonate metabolism protein PhnM n=5 Tax=Firmicutes RepID=E4LWZ8_9CLOT
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:EQJ62622.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phosphonate metabolism protein PhnM
L3_101_000G1_scaffold_406_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28121..28963)
DNA (843bp) protein (281aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VTZ5_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:EQJ62621.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type phosphonate transport system, ATPase component
L3_101_000G1_scaffold_406_30
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28963..29814)
DNA (852bp) protein (284aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B2D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27062.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
putative enzyme of phosphonate metabolism
Displaying items 1-30 of 59 in total

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