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L3_101_000G1_scaffold_416

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_416_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(274..1173)
DNA (900bp) protein (300aa)
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
prsA; peptidylprolyl isomerase (EC:5.2.1.8)
Foldase protein PrsA n=4 Tax=Lactobacillus casei group RepID=K6RGE2_LACCA
L3_101_000G1_scaffold_416_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1463..7171
DNA (5709bp) protein (1903aa)
Cell wall-associated proteinase PrtP n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp71 RepID=S2RF46_LACPA
Cell wall-associated proteinase PrtP {ECO:0000313|EMBL:EPC91727.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
peptidase S8
L3_101_000G1_scaffold_416_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7281..8213)
DNA (933bp) protein (311aa)
Catabolite control protein B n=27 Tax=Lactobacillus casei group RepID=B3W9Z8_LACCB
transcriptional regulator
Catabolite control protein B {ECO:0000313|EMBL:EPD06423.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L3_101_000G1_scaffold_416_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8363..8776)
DNA (414bp) protein (138aa)
Uncharacterized protein n=29 Tax=Lactobacillus casei group RepID=C5F8Z4_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC86229.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_101_000G1_scaffold_416_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9180..11789
DNA (2610bp) protein (870aa)
Lysyl-tRNA synthetase (Class II) n=23 Tax=Lactobacillus casei group RepID=D8GB66_LACCZ
Lysyl-tRNA synthetase {ECO:0000313|EMBL:GAN35863.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
lysyl-tRNA synthetase
L3_101_000G1_scaffold_416_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11894..12490
DNA (597bp) protein (199aa)
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Lactobacillus casei T71499 RepID=K6RJC7_LACCA
16S RNA G1207 methylase RsmC
16S RNA methylase {ECO:0000313|EMBL:EEQ66736.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_101_000G1_scaffold_416_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12547..12876
DNA (330bp) protein (110aa)
Uncharacterized protein n=49 Tax=Lactobacillus casei group RepID=C5F8Z1_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC85994.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_101_000G1_scaffold_416_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13018..13524
DNA (507bp) protein (169aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972, ECO:0000313|EMBL:CCK23347.1}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
tRNA-specific adenosine deaminase n=1 Tax=Lactobacillus casei W56 RepID=K0N7M1_LACCA
Nucleoside deaminase
L3_101_000G1_scaffold_416_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13997..15694
DNA (1698bp) protein (566aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EPD07212.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EPD07212.1};; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
DNA polymerase III subunits gamma and tau n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2UFY2_LACPA
DNA polymerase III, subunit gamma/tau
L3_101_000G1_scaffold_416_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15711..16019
DNA (309bp) protein (103aa)
Nucleoid-associated protein LBPG_02181 n=38 Tax=Lactobacillus casei group RepID=C5F8Y8_LACPA
hypothetical protein
Nucleoid-associated protein LC0644_0457 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_101_000G1_scaffold_416_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16334..16933
DNA (600bp) protein (200aa)
Recombination protein RecR n=50 Tax=Lactobacillus casei group RepID=RECR_LACC3
recR; Recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L3_101_000G1_scaffold_416_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16933..17196
DNA (264bp) protein (88aa)
Uncharacterized protein n=51 Tax=Lactobacillus casei group RepID=F2MA88_LACCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC85998.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_101_000G1_scaffold_416_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17792..18436
DNA (645bp) protein (215aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
Thymidylate kinase n=24 Tax=Lactobacillus casei group RepID=KTHY_LACC3
thymidylate kinase
L3_101_000G1_scaffold_416_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18471..18800
DNA (330bp) protein (110aa)
Uncharacterized protein n=56 Tax=Lactobacillus casei group RepID=C5F8Y4_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI68782.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_101_000G1_scaffold_416_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18800..19777
DNA (978bp) protein (326aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp70 RepID=S2TYF0_LACPA
DNA polymerase III subunit delta {ECO:0000313|EMBL:EPD07206.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L3_101_000G1_scaffold_416_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19782..20120
DNA (339bp) protein (113aa)
Initiation-control protein YabA n=54 Tax=Lactobacillus casei group RepID=YABA_LACC3
regulator of replication initiation timing
Initiation-control protein YabA {ECO:0000256|HAMAP-Rule:MF_01159, ECO:0000256|SAAS:SAAS00063209}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_101_000G1_scaffold_416_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20122..20979
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Ribosomal RNA small subunit methyltransferase I n=30 Tax=Lactobacillus casei group RepID=B3W9Y4_LACCB
hypothetical protein
L3_101_000G1_scaffold_416_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21074..21817
DNA (744bp) protein (248aa)
Acyl-ACP thioesterase n=44 Tax=Lactobacillus casei group RepID=K0N709_LACCA
Acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:EPC86004.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_101_000G1_scaffold_416_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21913..22893)
DNA (981bp) protein (327aa)
L-asparaginase n=15 Tax=Lactobacillus casei group RepID=C5F8X9_LACPA
l-asparaginase
L-asparaginase {ECO:0000313|EMBL:EPC86005.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_101_000G1_scaffold_416_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23377..23895
DNA (519bp) protein (173aa)
Folate transporter FolT n=48 Tax=Lactobacillus casei group RepID=FOLT_LACC3
Substrate-specific component FolT of folate ECF transporter
Folate ECF transporter substrate-specific component {ECO:0000313|EMBL:EKQ00805.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_101_000G1_scaffold_416_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24128..24733
DNA (606bp) protein (202aa)
Uncharacterized protein n=14 Tax=Lactobacillus casei group RepID=F2MA76_LACCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC91708.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_101_000G1_scaffold_416_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25217..25939
DNA (723bp) protein (241aa)
Uncharacterized protein YdiC n=50 Tax=Lactobacillus casei group RepID=K0NBZ8_LACCA
Inactive metal-dependent protease, putative molecular chaperone
Glycoprotein endopeptidase {ECO:0000313|EMBL:EPC92360.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_101_000G1_scaffold_416_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25917..26456
DNA (540bp) protein (180aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EEI68791.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EEI68791.1};; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
Ribosomal-protein-alanine N-acetyltransferase n=43 Tax=Lactobacillus casei group RepID=B3W9X8_LACCB
L3_101_000G1_scaffold_416_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


26490..27515
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA N6-adenosine threonylcarbamoyltransferase; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=36 Tax=Lactobacillus casei group RepID=TSAD_LACC3
Metalloendopeptidase, glycoprotease family
L3_101_000G1_scaffold_416_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27611..27946
DNA (336bp) protein (112aa)
Oligo-beta-mannoside-specific phosphotransferase enzyme IIB component n=51 Tax=Lactobacillus casei group RepID=K0MXC7_LACCA
PTS system, cellobiose-specific IIB component
PTS system protein {ECO:0000313|EMBL:EPC55227.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L3_101_000G1_scaffold_416_26
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28298..30250)
DNA (1953bp) protein (651aa)
ATP-binding component of an ABC superfamily transporter {ECO:0000313|EMBL:EKQ20030.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EKQ20030.1};; TaxID=1051661 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UW4.;"
ABC transporter ATP-binding protein Uup n=14 Tax=Lactobacillus casei group RepID=C5F8X2_LACPA
ABC transporter ATP-binding protein uup
L3_101_000G1_scaffold_416_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30468..31121
DNA (654bp) protein (218aa)
Redox-sensing transcriptional repressor Rex n=54 Tax=Lactobacillus casei group RepID=K0NBZ5_LACCA
Redox-sensitive transcriptional regulator
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_101_000G1_scaffold_416_28
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31263..31628
DNA (366bp) protein (122aa)
HTH-type transcriptional repressor ytrA n=54 Tax=Lactobacillus casei group RepID=K0N703_LACCA
Transcriptional regulator, GntR family
GntR family transcriptional regulator {ECO:0000313|EMBL:EKQ09162.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L3_101_000G1_scaffold_416_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31625..32512
DNA (888bp) protein (296aa)
ABC-type multidrug transport system, ATPase component n=20 Tax=Lactobacillus casei group RepID=B3W9X2_LACCB
ccmA; ABC transporter
ABC transporter-like protein {ECO:0000313|EMBL:EPC53573.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_101_000G1_scaffold_416_30
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32513..33541
DNA (1029bp) protein (343aa)
Uncharacterized protein n=8 Tax=Lactobacillus casei group RepID=S6C1Y4_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EKQ09160.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Hypothetical protein
Displaying items 1-30 of 49 in total

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