ggKbase home page

L3_101_000G1_scaffold_433

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_433_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(98..517)
DNA (420bp) protein (140aa)
Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp14 RepID=S2Q8X8_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI68088.1}; Flags: Fragment;; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_101_000G1_scaffold_433_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(587..1246)
DNA (660bp) protein (220aa)
NADH dehydrogenase {ECO:0000313|EMBL:EKQ11885.1}; EC=1.-.-.- {ECO:0000313|EMBL:EKQ11885.1};; EC=1.6.99.3 {ECO:0000313|EMBL:EKQ11885.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
NADH dehydrogenase n=17 Tax=Lactobacillus casei group RepID=K6QL36_LACCA
NAD(P)H-dependent quinone reductase
L3_101_000G1_scaffold_433_3
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1291..2136)
DNA (846bp) protein (282aa)
Acetoacetate decarboxylase n=10 Tax=Lactobacillus casei group RepID=Q03B66_LACC3
acetoacetate decarboxylase
Acetoacetate decarboxylase {ECO:0000313|EMBL:ABJ69556.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L3_101_000G1_scaffold_433_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2212..3072)
DNA (861bp) protein (287aa)
Short-chain dehydrogenase/reductase SDR n=31 Tax=Lactobacillus casei group RepID=B3WC04_LACCB
Short-chain dehydrogenase/oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEI68085.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_101_000G1_scaffold_433_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3273..4283
DNA (1011bp) protein (337aa)
Uncharacterized protein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=C2FDM8_LACPA
Putative transcriptional regulator {ECO:0000313|EMBL:BAN70928.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
Regulator of polyketide synthase expression
L3_101_000G1_scaffold_433_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4244..4756
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=C2FDM7_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EEI68083.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
regulator of polyketide synthase expression
L3_101_000G1_scaffold_433_7
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4849..5229
DNA (381bp) protein (127aa)
Uncharacterized protein n=48 Tax=Lactobacillus casei group RepID=K0N930_LACCA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERN49141.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_101_000G1_scaffold_433_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5345..6640)
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
Two-component sensor kinase n=10 Tax=Lactobacillus casei group RepID=S6CHF6_LACPA
signal transduction histidine kinase
L3_101_000G1_scaffold_433_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6637..7332)
DNA (696bp) protein (232aa)
Two-component system regulator n=44 Tax=Lactobacillus casei group RepID=B3WC00_LACCB
llrF; two-component system regulator
Transcriptional regulatory protein CiaR {ECO:0000313|EMBL:EPD05091.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L3_101_000G1_scaffold_433_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7490..7897
DNA (408bp) protein (136aa)
Uncharacterized protein n=29 Tax=Lactobacillus casei group RepID=C5FA63_LACPA
hypothetical protein
Conserved membrane protein, GtcA family {ECO:0000313|EMBL:AGP67553.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L3_101_000G1_scaffold_433_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7884..10034
DNA (2151bp) protein (717aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:EEI68078.1}; EC=2.4.1.109 {ECO:0000313|EMBL:EEI68078.1};; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
Dolichyl-phosphate-mannose-protein mannosyltransferase n=6 Tax=Lactobacillus casei group RepID=C2FDM2_LACPA
4-amino-4-deoxy-L-arabinose transferase
L3_101_000G1_scaffold_433_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10070..11047
DNA (978bp) protein (326aa)
ykcC; glycosyltransferase (EC:2.4.-.-)
Uncharacterized glycosyltransferase ykcC n=46 Tax=Lactobacillus casei group RepID=K0N302_LACCA
Glycosyl transferase {ECO:0000313|EMBL:EPC88446.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_101_000G1_scaffold_433_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11286..13949
DNA (2664bp) protein (888aa)
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEI68076.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EEI68076.1};; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
Cation transport ATPase n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6CHF5_LACPA
ATPase
L3_101_000G1_scaffold_433_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14059..15018
DNA (960bp) protein (320aa)
Oxidoreductase n=4 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6BY19_LACPA
NADPH:quinone reductase
Putative quinone oxidoreductase YhfP {ECO:0000313|EMBL:EPC51087.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_101_000G1_scaffold_433_15
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15246..16049)
DNA (804bp) protein (268aa)
ATP-binding component of an ABC superfamily methionine transporter {ECO:0000313|EMBL:EKQ04075.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EKQ04075.1};; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
ABC transporter n=37 Tax=Lactobacillus casei group RepID=C5FA58_LACPA
ABC transporter ATP-binding protein
L3_101_000G1_scaffold_433_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16052..17023)
DNA (972bp) protein (324aa)
ABC transporter permease component n=16 Tax=Lactobacillus casei group RepID=S6C356_LACPA
ABC transporter permease
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:GAN37884.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_101_000G1_scaffold_433_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17226..18194)
DNA (969bp) protein (323aa)
ABC transporter substrate binding component n=14 Tax=Lactobacillus casei group RepID=S6BPD7_LACPA
ABC transporter substrate-binding protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EPC38104.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L3_101_000G1_scaffold_433_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18753..19709)
DNA (957bp) protein (319aa)
ABC transporter substrate binding component n=7 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6CHF4_LACPA
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EPC62828.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L3_101_000G1_scaffold_433_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20191..22578)
DNA (2388bp) protein (796aa)
Beta-glucosidase n=9 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6BY17_LACPA
glycosyl hydrolase family 3
Beta-glucosidase {ECO:0000313|EMBL:BAN70914.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L3_101_000G1_scaffold_433_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23295..23945)
DNA (651bp) protein (217aa)
Uncharacterized protein n=8 Tax=Lactobacillus casei group RepID=C2FDK9_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC52829.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
NAD-dependent epimerase/dehydratase
L3_101_000G1_scaffold_433_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24176..25006
DNA (831bp) protein (277aa)
Uncharacterized protein n=29 Tax=Lactobacillus casei group RepID=S6C353_LACPA
hypothetical protein
SbcC family exonuclease {ECO:0000313|EMBL:EKQ12240.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_101_000G1_scaffold_433_22
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24999..26060
DNA (1062bp) protein (354aa)
Uncharacterized protein n=29 Tax=Lactobacillus casei group RepID=D8GED2_LACCZ
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ12239.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_101_000G1_scaffold_433_23
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26234..27055
DNA (822bp) protein (274aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EKQ01960.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EKQ01960.1};; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
Phosphomethylpyrimidine kinase n=45 Tax=Lactobacillus casei group RepID=B3WBY4_LACCB
hypothetical protein
L3_101_000G1_scaffold_433_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27127..27762)
DNA (636bp) protein (212aa)
Uncharacterized protein n=43 Tax=Lactobacillus casei group RepID=S6BY14_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EKQ15129.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
hypothetical protein
L3_101_000G1_scaffold_433_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27992..28516)
DNA (525bp) protein (175aa)
Uncharacterized protein n=24 Tax=Lactobacillus casei group RepID=C5FA41_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERN49158.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_101_000G1_scaffold_433_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28594..28773)
DNA (180bp) protein (60aa)
Uncharacterized protein n=13 Tax=Lactobacillus casei group RepID=S6C348_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN70907.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L3_101_000G1_scaffold_433_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28770..29438)
DNA (669bp) protein (223aa)
NAD(P)H oxidoreductase / putative NADPH-quinone reductase / flavodoxin 2 {ECO:0000313|EMBL:EKQ12234.1}; EC=1.-.-.- {ECO:0000313|EMBL:EKQ12234.1};; EC=1.6.99.- {ECO:0000313|EMBL:EKQ12234.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
MdaB protein n=28 Tax=Lactobacillus casei group RepID=C5FA39_LACPA
NADPH oxidoreductase YRKL / Putative NADPH-quinone reductase
L3_101_000G1_scaffold_433_28
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29441..30226)
DNA (786bp) protein (262aa)
Esterase/lipase {ECO:0000313|EMBL:EKQ12233.1}; EC=3.-.-.- {ECO:0000313|EMBL:EKQ12233.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Esterase n=20 Tax=Lactobacillus casei group RepID=S6CHF2_LACPA
esterase
L3_101_000G1_scaffold_433_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30437..31543)
DNA (1107bp) protein (369aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EEI68056.1}; EC=3.2.2.- {ECO:0000313|EMBL:EEI68056.1};; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
A/G-specific DNA glycosylase n=10 Tax=Lactobacillus casei group RepID=S6BY10_LACPA
hypothetical protein
L3_101_000G1_scaffold_433_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31713..31946
DNA (234bp) protein (78aa)
Uncharacterized protein n=7 Tax=Lactobacillus casei group RepID=D8GDY4_LACCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN70903.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
Displaying items 1-30 of 52 in total

View Taxonomy