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L3_101_000G1_scaffold_458

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_458_1
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1201
DNA (1200bp) protein (400aa)
Chitinase B {ECO:0000313|EMBL:BAA23796.1}; EC=3.2.1.14 {ECO:0000313|EMBL:BAA23796.1};; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
Chitinase B n=1 Tax=Clostridium paraputrificum RepID=O50076_9CLOT
carbohydrate binding domain protein
L3_101_000G1_scaffold_458_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1384..2655
DNA (1272bp) protein (424aa)
symporter n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A011B
Uncharacterized protein {ECO:0000313|EMBL:EEH99002.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dicarboxylate symporter family protein
L3_101_000G1_scaffold_458_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2779..3510
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PPS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK28435.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter family protein
L3_101_000G1_scaffold_458_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3503..4693
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99368.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC-2 type transporter family protein
L3_101_000G1_scaffold_458_5
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5036..6286
DNA (1251bp) protein (417aa)
Tat pathway signal sequence n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMF1_9BACT
Tat pathway signal sequence {ECO:0000313|EMBL:CDE40824.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
Tat (twin-arginine translocation) pathway signal sequence
L3_101_000G1_scaffold_458_6
unknown

Not on your lists

comp(6639..6773)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_101_000G1_scaffold_458_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6887..7369)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FNP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14868.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_101_000G1_scaffold_458_8
Campylobacter showae, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7422..7832)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Campylobacter showae CSUNSWCD RepID=M5IL88_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKU11915.1}; TaxID=1244083 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter showae CSUNSWCD.;"
hypothetical protein
L3_101_000G1_scaffold_458_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7959..9401
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FP16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14963.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_101_000G1_scaffold_458_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9549..11321
DNA (1773bp) protein (591aa)
Oligoendopeptidase F n=2 Tax=Clostridium botulinum B RepID=B2TMP2_CLOBB
Oligoendopeptidase, pepF/M3 family protein {ECO:0000313|EMBL:AIY81706.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
oligoendopeptidase F
L3_101_000G1_scaffold_458_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11466..12773
DNA (1308bp) protein (436aa)
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
Folylpolyglutamate synthase FolC {ECO:0000313|EMBL:AGX43733.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AGX43733.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Folylpolyglutamate synthase FolC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT71_CLOSA
L3_101_000G1_scaffold_458_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12798..14684
DNA (1887bp) protein (629aa)
HIRAN domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7Q7_9CLOT
HIRAN domain-containing protein {ECO:0000313|EMBL:EHJ00208.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_101_000G1_scaffold_458_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14736..14984)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97588.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_101_000G1_scaffold_458_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15139..16020
DNA (882bp) protein (294aa)
Putative=40-residue YVTN family beta-propeller repeat protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ES21_9CLOT
Putative=40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:CDG01975.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_101_000G1_scaffold_458_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16013..16546)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9N2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71260.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_101_000G1_scaffold_458_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16629..17405
DNA (777bp) protein (259aa)
deacetylase, partial n=1 Tax=Clostridium saccharoperbutylacetonicum RepID=UPI000376C9C7
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AGX43728.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_101_000G1_scaffold_458_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17513..18169
DNA (657bp) protein (219aa)
Single-stranded DNA binding protein n=3 Tax=Clostridium butyricum RepID=C4IJ12_CLOBU
single-strand binding family protein
Single-strand binding family protein {ECO:0000313|EMBL:AIY83222.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_101_000G1_scaffold_458_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18260..18997)
DNA (738bp) protein (246aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023632};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase DapH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVQ8_CLOSA
L3_101_000G1_scaffold_458_19
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19114..19629
DNA (516bp) protein (172aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XQB4_9CLOT
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ENZ01908.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
ATP:corrinoid adenosyltransferase
L3_101_000G1_scaffold_458_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20042..20797)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW89_CLOSA
dapB; 4-hydroxy-tetrahydrodipicolinate reductase DapB
L3_101_000G1_scaffold_458_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20809..21687)
DNA (879bp) protein (293aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Clostridium botulinum E RepID=B2V5A8_CLOBA
L3_101_000G1_scaffold_458_22
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21704..22693)
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y248_9CLOT
L3_101_000G1_scaffold_458_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22871..23122
DNA (252bp) protein (84aa)
Small, acid-soluble spore protein, alpha/beta family n=2 Tax=Clostridium perfringens RepID=Q0SRS7_CLOPS
small acid-soluble spore protein alpha/beta family protein
Small, acid-soluble spore protein, alpha/beta family {ECO:0000313|EMBL:ABG87200.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_101_000G1_scaffold_458_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23189..23938
DNA (750bp) protein (250aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase {ECO:0000313|EMBL:AGX43718.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43718.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative methyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT58_CLOSA
L3_101_000G1_scaffold_458_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23940..24827
DNA (888bp) protein (296aa)
33 kDa chaperonin n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URL2_CLOBO
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hslO; Hsp33-like chaperonin
L3_101_000G1_scaffold_458_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25174..25791
DNA (618bp) protein (206aa)
HD superfamily hydrolase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0Z4_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83965.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_101_000G1_scaffold_458_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26089..26790)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ78_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56378.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_101_000G1_scaffold_458_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26933..27823
DNA (891bp) protein (297aa)
Putative sporulation protein YtxC n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EL66_9CLOT
Putative sporulation protein YtxC {ECO:0000313|EMBL:CDG01957.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ytxC; putative sporulation protein YtxC
L3_101_000G1_scaffold_458_29
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27865..28539
DNA (675bp) protein (225aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0Z2_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
infC; translation initiation factor IF-3
L3_101_000G1_scaffold_458_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28561..28758
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C6_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
50S ribosomal protein L35
Displaying items 1-30 of 52 in total

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