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L3_101_000G1_scaffold_491

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_491_1
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..123
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RLV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA57470.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
putative phage protein
L3_101_000G1_scaffold_491_2
Listeria phage LP-030-2, Caudovirales, Viruses

Not on your lists

424..627
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1QBE9_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:AFN39964.1}; TaxID=1173743 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Listeria phage LP-030-2.;"
hypothetical protein
L3_101_000G1_scaffold_491_3
unknown

Not on your lists

comp(900..1226)
DNA (327bp) protein (109aa)

This feature has no annotations

L3_101_000G1_scaffold_491_4

Not on your lists

comp(1412..1819)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002F485FF
Uncharacterized protein {ECO:0000313|EMBL:ETJ21063.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_101_000G1_scaffold_491_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1816..2835)
DNA (1020bp) protein (340aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QH84_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:EKY27055.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pyridine nucleotide-disulfide oxidoreductase family protein
L3_101_000G1_scaffold_491_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2832..3824)
DNA (993bp) protein (331aa)
Putative Oxidoreductase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FMH6_9CLOT
Putative Oxidoreductase family protein {ECO:0000313|EMBL:CDG01829.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_101_000G1_scaffold_491_7
unknown

Not on your lists

4003..4167
DNA (165bp) protein (55aa)

This feature has no annotations

L3_101_000G1_scaffold_491_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4260..5447)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96772.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ROK family transcriptional regulator
L3_101_000G1_scaffold_491_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5674..6969
DNA (1296bp) protein (432aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCE7_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
celB; PTS system cellobiose-specific transporter subunit IIC
L3_101_000G1_scaffold_491_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7017..7916
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96776.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PEP phosphonomutase
L3_101_000G1_scaffold_491_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8268..8513)
DNA (246bp) protein (82aa)
TM2 domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAQ5_9FIRM
TM2 domain protein {ECO:0000313|EMBL:EDS11235.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
TM2 domain-containing protein
L3_101_000G1_scaffold_491_12
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8651..9472)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F09E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN51637.1}; Flags: Precursor;; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_101_000G1_scaffold_491_13
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9465..10526)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NC41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB87690.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L3_101_000G1_scaffold_491_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10780..11610
DNA (831bp) protein (277aa)
Beta-glucoside operon antiterminator n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1ML92_9CLOT
arbG2; beta-glucoside operon antiterminator
Beta-glucoside operon antiterminator {ECO:0000313|EMBL:AGF58684.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_101_000G1_scaffold_491_15
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11782..13638
DNA (1857bp) protein (619aa)
bglP7; PTS system beta-glucoside-specific EIIBCA component BglP (EC:2.7.1.69 2.7.1.-)
PTS system beta-glucoside-specific EIIBCA component BglP {ECO:0000313|EMBL:AGF58683.1}; EC=2.7.1.- {ECO:0000313|EMBL:AGF58683.1};; EC=2.7.1.69 {ECO:0000313|EMBL:AGF58683.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
PTS system beta-glucoside-specific EIIBCA component BglP n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MR97_9CLOT
L3_101_000G1_scaffold_491_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13661..15115
DNA (1455bp) protein (485aa)
bglH3; aryl-phospho-beta-D-glucosidase BglH (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:AGF58682.1}; EC=3.2.1.86 {ECO:0000313|EMBL:AGF58682.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Aryl-phospho-beta-D-glucosidase BglH n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N5J1_9CLOT
L3_101_000G1_scaffold_491_17
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15119..16045
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI000306A6B6
2-keto-3-deoxygluconate permease {ECO:0000313|EMBL:ETT29603.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
kdgT2; 2-keto-3-deoxygluconate permease KdgT
L3_101_000G1_scaffold_491_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16203..16763
DNA (561bp) protein (187aa)
Ribosomal RNA adenine dimethylase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWK8_CLOBA
ribosomal RNA adenine dimethylase
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIL07549.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_101_000G1_scaffold_491_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16776..17462
DNA (687bp) protein (229aa)
Regulatory protein VanR n=2 Tax=Clostridium botulinum E RepID=B2UWK7_CLOBA
regulatory protein VanR
Regulatory protein VanR {ECO:0000313|EMBL:EES50331.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_101_000G1_scaffold_491_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17459..18304
DNA (846bp) protein (282aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
Histidine kinase n=2 Tax=Clostridium botulinum B RepID=B2TNR1_CLOBB
histidine kinase
L3_101_000G1_scaffold_491_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18288..18755
DNA (468bp) protein (156aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
histidine kinase n=1 Tax=Clostridium botulinum RepID=UPI00037D2DE7
histidine kinase
L3_101_000G1_scaffold_491_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18796..19437)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003620B36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07546.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_101_000G1_scaffold_491_23
unknown

Not on your lists

comp(19628..19813)
DNA (186bp) protein (62aa)
MutS domain-containing protein n=1 Tax=Clostridium intestinale URNW RepID=U2N6C0_9CLOT
L3_101_000G1_scaffold_491_24
unknown

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19967..20338
DNA (372bp) protein (124aa)

This feature has no annotations

L3_101_000G1_scaffold_491_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20669..22762
DNA (2094bp) protein (698aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
PAS domain S-box protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHM3_9CLOT
two-component sensor kinase
L3_101_000G1_scaffold_491_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22812..23816)
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU3_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY26456.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_101_000G1_scaffold_491_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24020..24970
DNA (951bp) protein (317aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFX9_9CLOT
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EOR28202.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative secreted protein
L3_101_000G1_scaffold_491_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24957..25949
DNA (993bp) protein (331aa)
Putative iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEQ4_9CLOT
Putative iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EKY26458.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative membrane protein
L3_101_000G1_scaffold_491_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25949..26956
DNA (1008bp) protein (336aa)
Putative ferrichrome transport system permease protein FhuG n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN7_9CLOT
Putative ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:EKY26459.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transport system permease
L3_101_000G1_scaffold_491_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26959..27753
DNA (795bp) protein (265aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFK1_9CLOT
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY26460.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Displaying items 1-30 of 81 in total

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