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L3_101_000G1_scaffold_517

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_517_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..1060)
DNA (1059bp) protein (353aa)
Cro/CI family Transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ3_9FIRM
Cro/CI family Transcriptional regulator {ECO:0000313|EMBL:EFW03039.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_101_000G1_scaffold_517_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1675..3003)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Sensor protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ4_9FIRM
histidine kinase
L3_101_000G1_scaffold_517_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3000..3656)
DNA (657bp) protein (219aa)
DNA-binding response regulator VncR n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ5_9FIRM
DNA-binding response regulator VncR {ECO:0000313|EMBL:EFW03041.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transcriptional regulator
L3_101_000G1_scaffold_517_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3703..5079)
DNA (1377bp) protein (459aa)
Transmembrane protein Vexp3 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ6_9FIRM
Transmembrane protein Vexp3 {ECO:0000313|EMBL:EFW03042.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transmembrane protein Vexp3
L3_101_000G1_scaffold_517_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5103..5753)
DNA (651bp) protein (217aa)
ABC transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ7_9FIRM
ABC transporter {ECO:0000313|EMBL:EFW03043.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
multidrug ABC transporter ATP-binding protein
L3_101_000G1_scaffold_517_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5766..7091)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03044.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC transporter permease
L3_101_000G1_scaffold_517_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7244..7387)
DNA (144bp) protein (48aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile Y231 RepID=T4E8L4_CLODI
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ67451.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
putative transcriptional regulator
L3_101_000G1_scaffold_517_8
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7504..8304)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C613_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS73582.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
L3_101_000G1_scaffold_517_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8294..9184)
DNA (891bp) protein (297aa)
ABC transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6Q9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJU72855.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
ABC transporter
L3_101_000G1_scaffold_517_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9464..11959)
DNA (2496bp) protein (832aa)
Cadmium-transporting ATPase {ECO:0000313|EMBL:CDH90422.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CDH90422.1};; Cation-transporting ATPase PacL {ECO:0000313|EMBL:ACD23526.1}; EC=3.6.3.- {ECO:0000313|EMBL:ACD23526.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
cation-transporting ATPase PacL (EC:3.6.3.-)
HAD family hydrolase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287DF19
L3_101_000G1_scaffold_517_11
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12402..13790
DNA (1389bp) protein (463aa)
MATE efflux family protein n=2 Tax=Firmicutes RepID=H1BPA8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFE47916.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
MATE efflux family protein
L3_101_000G1_scaffold_517_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13928..14233)
DNA (306bp) protein (102aa)
GNAT family acetyltransferase n=2 Tax=Clostridium botulinum RepID=M2A041_CLOBO
GNAT family acetyltransferase {ECO:0000313|EMBL:EKN43435.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
acetyltransferase
L3_101_000G1_scaffold_517_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14257..14796)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20082.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_101_000G1_scaffold_517_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14822..15661)
DNA (840bp) protein (280aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4G8_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EEH98626.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_101_000G1_scaffold_517_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15823..15978)
DNA (156bp) protein (52aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QUM3_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP56407.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_101_000G1_scaffold_517_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16127..16858)
DNA (732bp) protein (244aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQW7_CLOPA
Transcriptional regulator {ECO:0000313|EMBL:ETD66535.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
RpiR family transcriptional regulator
L3_101_000G1_scaffold_517_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16968..18314)
DNA (1347bp) protein (449aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XMV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01048.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L3_101_000G1_scaffold_517_18
unknown

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comp(18469..19266)
DNA (798bp) protein (266aa)

This feature has no annotations

L3_101_000G1_scaffold_517_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19351..21321)
DNA (1971bp) protein (657aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWW2_CLOBA
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:KIE48266.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
methyl-accepting chemotaxis protein
L3_101_000G1_scaffold_517_20
unknown

Not on your lists

comp(21463..21567)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_101_000G1_scaffold_517_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21570..22589)
DNA (1020bp) protein (340aa)
pyk1; pyruvate kinase Pyk (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Pyruvate kinase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LY09_9CLOT
L3_101_000G1_scaffold_517_22
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22781..23182
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NKT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29758.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L3_101_000G1_scaffold_517_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23360..23848
DNA (489bp) protein (163aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QU58_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33375.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_101_000G1_scaffold_517_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24217..24627
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQX4_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES49924.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L3_101_000G1_scaffold_517_25
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24881..28546)
DNA (3666bp) protein (1222aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82372.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
alpha-L-arabinofuranosidase
L3_101_000G1_scaffold_517_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28726..29655)
DNA (930bp) protein (310aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pfkB; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase LacC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZG5_CLOSA
L3_101_000G1_scaffold_517_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29674..30528)
DNA (855bp) protein (285aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.-)
fructose-bisphosphate aldolase n=1 Tax=Clostridium botulinum RepID=UPI0002D5B856
Class II aldolase, tagatose bisphosphate family {ECO:0000313|EMBL:AIY79875.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_101_000G1_scaffold_517_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30546..31061)
DNA (516bp) protein (172aa)
lacB; galactose-6-phosphate isomerase subunit lacB (EC:5.3.1.26)
Galactose-6-phosphate isomerase subunit lacB {ECO:0000313|EMBL:AIY84639.1}; EC=5.3.1.26 {ECO:0000313|EMBL:AIY84639.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Galactose-6-phosphate isomerase subunit lacB n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QHC3_9BACI
L3_101_000G1_scaffold_517_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31074..31502)
DNA (429bp) protein (143aa)
lacA; isomerase/acetyltransferase (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=2 Tax=Clostridium butyricum RepID=B1R026_CLOBU
Galactose-6-phosphate isomerase {ECO:0000313|EMBL:KJU72899.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_101_000G1_scaffold_517_30
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31518..32996)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002D6E81D
Uncharacterized protein {ECO:0000313|EMBL:EOH74407.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
sulfatase
Displaying items 1-30 of 55 in total

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