ggKbase home page

L3_101_000G1_scaffold_699

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_699_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(475..666)
DNA (192bp) protein (64aa)
Escherichia coli 1540 plasmid pIP1206 complete genome n=233 Tax=Bacteria RepID=Q1A2M1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETY36656.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
L3_101_000G1_scaffold_699_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(715..1140)
DNA (426bp) protein (142aa)
Antirestriction protein n=25 Tax=Enterobacteriaceae RepID=E9Y7P6_ECOLX
ycgB; hypothetical protein
Antirestriction protein {ECO:0000313|EMBL:AIG72286.1}; Putative antirestriction protein {ECO:0000313|EMBL:ADW79495.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_101_000G1_scaffold_699_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1548..1982)
DNA (435bp) protein (145aa)
Transcription-repair coupling factor (Superfamily II helicase)-like protein n=2 Tax=Escherichia coli RepID=I5ERK6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EYV07817.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
hypothetical protein
L3_101_000G1_scaffold_699_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1994..2215)
DNA (222bp) protein (74aa)
Uncharacterized protein n=25 Tax=Escherichia coli RepID=C8UB41_ECO10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV50208.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_101_000G1_scaffold_699_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2216..2899)
DNA (684bp) protein (228aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Putative methylase YubD n=29 Tax=cellular organisms RepID=YUBD_ECOLI
putative methylase
L3_101_000G1_scaffold_699_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3289..3711)
DNA (423bp) protein (141aa)
StbB n=11 Tax=Enterobacteriaceae RepID=C7SA11_ECOLX
parB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDG84112.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_101_000G1_scaffold_699_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3714..4694)
DNA (981bp) protein (327aa)
Plasmid segregation protein ParM n=51 Tax=Enterobacteriaceae RepID=A7ZGT7_ECO24
parM; plasmid segregation protein ParM
Plasmid segregation protein parM {ECO:0000313|EMBL:END84119.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L3_101_000G1_scaffold_699_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5034..5366
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMNK88 RepID=F4MD98_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE60095.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_9
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5426..5632
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 RepID=V1RS53_SALET
Uncharacterized protein {ECO:0000313|EMBL:ESG03813.1}; TaxID=1124962 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673.;"
L3_101_000G1_scaffold_699_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5703..6305)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Escherichia coli O139:H28 (strain E24377A / ETEC) RepID=A7ZGU2_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV16304.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
L3_101_000G1_scaffold_699_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6723..7550
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=A7ZGU3_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV16287.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
L3_101_000G1_scaffold_699_12
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8077..8745)
DNA (669bp) protein (223aa)
UPI0003D2C716 related cluster n=1 Tax=unknown RepID=UPI0003D2C716
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP88220.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
L3_101_000G1_scaffold_699_13
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8745..10904)
DNA (2160bp) protein (720aa)
UPI0003D33427 related cluster n=1 Tax=unknown RepID=UPI0003D33427
Helicase {ECO:0000313|EMBL:KIE41874.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
putative uncharacterized protein
L3_101_000G1_scaffold_699_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11498..11788)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L3PFI6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELE46648.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
DNA-binding protein
L3_101_000G1_scaffold_699_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11785..12096)
DNA (312bp) protein (104aa)
Prophage protein gp49 n=34 Tax=Escherichia coli RepID=Q2VP18_ECOLX
prophage protein gp49
Uncharacterized protein {ECO:0000313|EMBL:EMU56373.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
L3_101_000G1_scaffold_699_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13017..14093)
DNA (1077bp) protein (359aa)
IncFII RepA family protein n=1 Tax=Escherichia coli 3.3884 RepID=I2Y039_ECOLX
Replication initiation protein {ECO:0000313|EMBL:AKF16826.1}; TaxID=1619910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H7.;"
repZ; replication initiation protein RepZ
L3_101_000G1_scaffold_699_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14915..15316
DNA (402bp) protein (134aa)
Conjugal transfer protein TraB n=1 Tax=Escherichia coli UMNK88 RepID=F4MD89_ECOLX
traB; conjugal transfer protein TraB
Conjugal transfer protein TraB {ECO:0000313|EMBL:AEE60086.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15414..16091
DNA (678bp) protein (226aa)
Putative conjugal transfer protein n=1 Tax=Escherichia coli UMNK88 RepID=F4MD88_ECOLX
putative conjugal transfer protein
Putative conjugal transfer protein {ECO:0000313|EMBL:AEE60085.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_19
unknown

Not on your lists

16081..16281
DNA (201bp) protein (67aa)

This feature has no annotations

L3_101_000G1_scaffold_699_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16420..16662
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMNK88 RepID=F4MD87_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE60084.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16672..17169
DNA (498bp) protein (166aa)
Type IV pilus biogenesis protein PilL n=1 Tax=Escherichia coli UMNK88 RepID=F4MD86_ECOLX
pilL; type IV pilus biogenesis protein PilL
Type IV pilus biogenesis protein PilL {ECO:0000313|EMBL:AEE60083.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_22
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17169..17639
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca MGH 42 RepID=V3KL03_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EHT05164.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
pilT2; conjugal transfer protein
L3_101_000G1_scaffold_699_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17666..18091
DNA (426bp) protein (142aa)
Conjugal transfer protein TraH n=1 Tax=Escherichia coli UMNK88 RepID=F4MD84_ECOLX
traH; conjugal transfer protein TraH
Conjugal transfer protein TraH {ECO:0000313|EMBL:AEE60081.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18088..18870
DNA (783bp) protein (261aa)
Conjugal transfer protein TraI n=1 Tax=Escherichia coli UMNK88 RepID=F4MD83_ECOLX
traI; conjugal transfer protein TraI
Conjugal transfer protein TraI {ECO:0000313|EMBL:AEE60080.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18876..20048
DNA (1173bp) protein (391aa)
Conjugal transfer protein TraJ n=1 Tax=Escherichia coli UMNK88 RepID=F4MD82_ECOLX
traJ; conjugal transfer protein TraJ
Conjugal transfer protein TraJ {ECO:0000313|EMBL:AEE60079.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_26
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20041..20301
DNA (261bp) protein (87aa)
IncI1 plasmid conjugative transfer protein TraK n=4 Tax=Salmonella enterica I RepID=G5NMS6_SALET
IncI1 plasmid conjugative transfer protein TraK {ECO:0000313|EMBL:EHC47103.1}; TaxID=913075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Inverness str. R8-3668.;"
conjugal transfer protein
L3_101_000G1_scaffold_699_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20319..23663
DNA (3345bp) protein (1115aa)
DNA primase SogL n=1 Tax=Escherichia coli UMNK88 RepID=F4MD80_ECOLX
DNA primase SogL {ECO:0000313|EMBL:AEE60077.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
sogL; DNA primase SogL
L3_101_000G1_scaffold_699_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23678..24157
DNA (480bp) protein (160aa)
Conjugal transfer protein TraL n=1 Tax=Escherichia coli UMNK88 RepID=F4MD79_ECOLX
traL; conjugal transfer protein TraL
Conjugal transfer protein TraL {ECO:0000313|EMBL:AEE60076.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24177..24848
DNA (672bp) protein (224aa)
Conjugal transfer protein TraM n=1 Tax=Escherichia coli UMNK88 RepID=F4MD78_ECOLX
traM; conjugal transfer protein TraM
Conjugal transfer protein TraM {ECO:0000313|EMBL:AEE60075.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_101_000G1_scaffold_699_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24845..25888
DNA (1044bp) protein (348aa)
Conjugal transfer protein TraN n=1 Tax=Escherichia coli UMNK88 RepID=F4MD77_ECOLX
traN; conjugal transfer protein TraN
Conjugal transfer protein TraN {ECO:0000313|EMBL:AEE60074.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
Displaying items 1-30 of 55 in total

View Taxonomy