ggKbase home page

L3_101_000G1_scaffold_1122

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_1122_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(27..1064)
DNA (1038bp) protein (346aa)
Protein RecA n=5 Tax=Erysipelotrichaceae RepID=B0N0K4_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
recA; recombinase A
L3_101_000G1_scaffold_1122_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1103..1561)
DNA (459bp) protein (153aa)
Competence/damage-inducible domain protein CinA n=5 Tax=Erysipelotrichaceae RepID=B0N0K5_9FIRM
Competence/damage-inducible protein CinA domain {ECO:0000313|EMBL:CCZ32216.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cinA; competence-damage inducible protein
L3_101_000G1_scaffold_1122_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1561..2154)
DNA (594bp) protein (198aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N0K6_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CCZ32215.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L3_101_000G1_scaffold_1122_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2154..3146)
DNA (993bp) protein (331aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N0K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32214.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_101_000G1_scaffold_1122_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3529..4674)
DNA (1146bp) protein (382aa)
Lactaldehyde reductase n=5 Tax=Erysipelotrichaceae RepID=B0N0K8_9FIRM
Lactaldehyde reductase {ECO:0000313|EMBL:EHQ45117.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L-1,2-propanediol oxidoreductase
L3_101_000G1_scaffold_1122_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4815..5369)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1APY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45118.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
transcriptional regulator
L3_101_000G1_scaffold_1122_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6313..6750
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=4 Tax=Erysipelotrichaceae RepID=B0N0I2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31902.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_101_000G1_scaffold_1122_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6750..7817
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19940.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_101_000G1_scaffold_1122_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7936..8256)
DNA (321bp) protein (107aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92685.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_1122_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8268..8675)
DNA (408bp) protein (136aa)
DNA-binding helix-turn-helix protein n=4 Tax=Erysipelotrichaceae RepID=B0N0I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31905.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator
L3_101_000G1_scaffold_1122_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8818..9138)
DNA (321bp) protein (107aa)
DivIVA domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N0I6_9FIRM
DivIVA domain-containing protein {ECO:0000313|EMBL:EHQ45123.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cell division protein GpsB
L3_101_000G1_scaffold_1122_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9345..9944
DNA (600bp) protein (200aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Holliday junction resolvase RecU n=5 Tax=Erysipelotrichaceae RepID=B0N0I7_9FIRM
recU; Holliday junction-specific endonuclease
L3_101_000G1_scaffold_1122_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9934..12594
DNA (2661bp) protein (887aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9QZN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92681.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
penicillin-binding protein, 1A
L3_101_000G1_scaffold_1122_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12657..13298)
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Endonuclease III n=3 Tax=Erysipelotrichaceae RepID=B0N0I9_9FIRM
endonuclease III
L3_101_000G1_scaffold_1122_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13291..13890)
DNA (600bp) protein (200aa)
DnaD and phage-associated domain-containing protein n=5 Tax=Erysipelotrichaceae RepID=C3RN87_9FIRM
Putative DNA replication protein DnaD {ECO:0000313|EMBL:CCZ31910.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dnaD; Initiation of chromosome replication (DNA synthesis)
L3_101_000G1_scaffold_1122_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13895..14305)
DNA (411bp) protein (137aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RN86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31911.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_101_000G1_scaffold_1122_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14463..15170)
DNA (708bp) protein (236aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RN85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45145.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_101_000G1_scaffold_1122_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15244..15516)
DNA (273bp) protein (91aa)
DNA-binding protein HU n=5 Tax=Erysipelotrichaceae RepID=B0N0J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92676.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hbsU; non-specific DNA-binding protein II (Hbsu-like protein)
L3_101_000G1_scaffold_1122_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15581..17056)
DNA (1476bp) protein (492aa)
Stage IV sporulation protein A n=3 Tax=Coprobacillus RepID=G9QZM6_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CCZ33641.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
spoIVA; stage IV sporulation protein A
L3_101_000G1_scaffold_1122_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17154..18020
DNA (867bp) protein (289aa)
AraC-like ligand binding domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N0J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45148.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
AraC family transcriptional regulator
L3_101_000G1_scaffold_1122_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18834..19511
DNA (678bp) protein (226aa)
Rubredoxin n=4 Tax=Erysipelotrichaceae RepID=B0N0J7_9FIRM
Rubrerythrin {ECO:0000313|EMBL:CCZ33644.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rubrerythrin
L3_101_000G1_scaffold_1122_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19793..22021)
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QZM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92672.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glycoside hydrolase family protein
L3_101_000G1_scaffold_1122_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22011..23498)
DNA (1488bp) protein (496aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0J9_9FIRM
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EDS19956.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
melibiose:sodium symporter
L3_101_000G1_scaffold_1122_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23467..23934)
DNA (468bp) protein (156aa)
PTS system, glucose subfamily, IIA component n=3 Tax=Erysipelotrichaceae RepID=B0N0K0_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHQ45152.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
PTS system, glucose-specific IICBA component
L3_101_000G1_scaffold_1122_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24227..25390
DNA (1164bp) protein (388aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDS19958.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDS19958.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
dapL2; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
Aminotransferase, class I/II n=3 Tax=Erysipelotrichaceae RepID=B0N0K1_9FIRM
L3_101_000G1_scaffold_1122_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25519..26424)
DNA (906bp) protein (302aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=5 Tax=Erysipelotrichaceae RepID=B0N0K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33658.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_101_000G1_scaffold_1122_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26663..27298)
DNA (636bp) protein (212aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.18)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RN74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92666.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_101_000G1_scaffold_1122_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27351..28781)
DNA (1431bp) protein (477aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Pyruvate kinase n=4 Tax=Erysipelotrichaceae RepID=B0N0Z7_9FIRM
pyruvate kinase
L3_101_000G1_scaffold_1122_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28893..31904)
DNA (3012bp) protein (1004aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QZL5_9FIRM
glycoside hydrolase family 2
L3_101_000G1_scaffold_1122_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32305..33642)
DNA (1338bp) protein (446aa)
MATE efflux family protein n=3 Tax=Coprobacillus RepID=C3RN71_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHQ45159.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
MATE efflux family protein
Displaying items 1-30 of 105 in total

View Taxonomy