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L3_101_000G1_scaffold_5496

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_5496_1
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23..1135
DNA (1113bp) protein (371aa)
mnmA; tRNA 2-thiouridylase (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
tRNA-specific 2-thiouridylase MnmA n=6 Tax=cellular organisms RepID=F5RSW8_9ENTR
L3_101_000G1_scaffold_5496_2
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1263..1736
DNA (474bp) protein (158aa)
High frequency lysogenization protein HflD homolog n=10 Tax=Enterobacter cloacae complex RepID=F5RSW9_9ENTR
lysogenization regulator
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1432556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae ISC8.;"
L3_101_000G1_scaffold_5496_3
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1756..2961
DNA (1206bp) protein (402aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Enterobacter cloacae UCICRE 3 RepID=V3GSL4_ENTCL
L3_101_000G1_scaffold_5496_4
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3046..3438)
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Enterobacter cloacae complex RepID=U7CPP9_9ENTR
anti-adapter protein IraM
Anti-adapter protein IraM {ECO:0000313|EMBL:KJN16070.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
L3_101_000G1_scaffold_5496_5
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3914..4585
DNA (672bp) protein (224aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=13 Tax=Enterobacteriaceae RepID=D6DU08_ENTCL
transcriptional regulator
Transcriptional regulatory protein phoP {ECO:0000313|EMBL:KDM51864.1}; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
L3_101_000G1_scaffold_5496_6
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4586..6049
DNA (1464bp) protein (488aa)
Sensor protein phoQ n=1 Tax=Enterobacter cloacae UCICRE 9 RepID=V3FLI5_ENTCL
sensor protein PhoQ
Sensor protein PhoQ {ECO:0000313|EMBL:KJN16072.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
L3_101_000G1_scaffold_5496_7
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6141..7262
DNA (1122bp) protein (374aa)
Cupin 4 family protein n=4 Tax=cellular organisms RepID=U7CMP3_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDM51862.1}; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
L3_101_000G1_scaffold_5496_8
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7355..7846)
DNA (492bp) protein (164aa)
Transposase n=1 Tax=Enterobacter cloacae UCICRE 9 RepID=V3EG67_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:KJN16074.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
hypothetical protein
L3_101_000G1_scaffold_5496_9
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7947..9170)
DNA (1224bp) protein (408aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
PREDICTED: peptidase T-like n=1 Tax=Cucumis sativus RepID=UPI0002B42466
peptidase T
L3_101_000G1_scaffold_5496_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9438..10145
DNA (708bp) protein (236aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1432556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae ISC8.;"
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Enterobacter sp. MGH 14 RepID=U7CXQ1_9ENTR
potA; putrescine/spermidine ABC transporter ATPase
L3_101_000G1_scaffold_5496_11
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10117..10503
DNA (387bp) protein (129aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Enterobacter cloacae UCICRE 9 RepID=V3EEM2_ENTCL
potA; putrescine/spermidine ABC transporter ATPase
L3_101_000G1_scaffold_5496_12
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10551..11273
DNA (723bp) protein (241aa)
Spermidine/putrescine transport system permease potB n=3 Tax=Enterobacter cloacae complex RepID=U7CK94_9ENTR
potB; spermidine/putrescine ABC transporter permease
Spermidine/putrescine transport system permease potB {ECO:0000313|EMBL:KDM51858.1}; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
L3_101_000G1_scaffold_5496_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11270..12055
DNA (786bp) protein (262aa)
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein n=1 Tax=Enterobacter hormaechei ATCC 49162 RepID=F5RSY0_9ENTR
potC; spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AJB70628.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_101_000G1_scaffold_5496_14
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12058..12894
DNA (837bp) protein (279aa)
Spermidine/putrescine-binding periplasmic protein n=3 Tax=Enterobacter cloacae complex RepID=U7CLK8_9ENTR
potD; spermidine/putrescine ABC transporter substrate-binding protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
L3_101_000G1_scaffold_5496_15
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12929..13750)
DNA (822bp) protein (274aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
NAD-dependent protein deacylase n=4 Tax=Enterobacter cloacae complex RepID=U7CPN9_9ENTR
NAD-dependent deacetylase
L3_101_000G1_scaffold_5496_16
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13765..14676)
DNA (912bp) protein (304aa)
N-acetylglucosamine kinase (EC:2.7.1.59)
N-acetyl-D-glucosamine kinase {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012116}; EC=2.7.1.59 {ECO:0000256|HAMAP-Rule:MF_01271};; GlcNAc kinase {ECO:0000256|HAMAP-Rule:MF_01271}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
N-acetyl-D-glucosamine kinase n=1 Tax=Enterobacter cloacae UCICRE 9 RepID=V3EEL8_ENTCL
L3_101_000G1_scaffold_5496_17
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14805..15143)
DNA (339bp) protein (113aa)
Outer membrane-specific lipoprotein transporter subunit LolE n=15 Tax=Shigella flexneri RepID=I0VBY5_SHIFL
YcfW
Lipoprotein-releasing system transmembrane protein lolE {ECO:0000313|EMBL:ELC20303.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
L3_101_000G1_scaffold_5496_18
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15091..15771)
DNA (681bp) protein (227aa)
Lipoprotein-releasing system transmembrane protein lolE n=1 Tax=Enterobacter cloacae UCICRE 11 RepID=V3DL79_ENTCL
outer membrane-specific lipoprotein transporter subunit LolE
Lipoprotein-releasing system transmembrane protein lolE {ECO:0000313|EMBL:KDM51853.1}; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
L3_101_000G1_scaffold_5496_19
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15771..16472)
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
Lipoprotein-releasing system ATP-binding protein LolD n=4 Tax=Enterobacter cloacae complex RepID=U7CMN1_9ENTR
lolD; lipoprotein ABC transporter ATP-binding protein
L3_101_000G1_scaffold_5496_20
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16465..16893)
DNA (429bp) protein (143aa)
Lipoprotein ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Enterobacter hormaechei ATCC 49162 RepID=F5RSY6_9ENTR
lipoprotein releasing system, transmembrane protein, LolC/E family
Outer membrane-specific lipoprotein transporter subunit LolC {ECO:0000313|EMBL:AJB70622.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Displaying 20 items

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