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L3_101_000G1_scaffold_387

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_387_1
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..733)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JQS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35602.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
ParB-like partition proteins
L3_101_000G1_scaffold_387_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(687..1514)
DNA (828bp) protein (276aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72702.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ATPases involved in chromosome partitioning
L3_101_000G1_scaffold_387_3
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1624..2448)
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Streptococcus mitis RepID=V8I3L0_STRMT
Uncharacterized protein {ECO:0000313|EMBL:KER07526.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
L3_101_000G1_scaffold_387_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2690..4372)
DNA (1683bp) protein (561aa)
Putative RNA-directed DNA polymerase n=1 Tax=Enterococcus faecium RepID=B3CKE3_ENTFC
RNA-directed DNA polymerase retron ec67
Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:CAP62664.1}; TaxID=1352 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (Streptococcus faecium).;"
L3_101_000G1_scaffold_387_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4731..5003)
DNA (273bp) protein (91aa)
UvrABC system protein B n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMW0_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
excinuclease ABC, B subunit
L3_101_000G1_scaffold_387_6
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5055..5171)
DNA (117bp) protein (39aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EHW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99470.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_387_7
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5152..5442)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37408.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_387_8
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5439..5585)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DHY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA87245.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
Virulence protein
L3_101_000G1_scaffold_387_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5705..7000)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FBM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99467.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_101_000G1_scaffold_387_10
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7191..11720)
DNA (4530bp) protein (1510aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37410.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Cna protein B-type domain.
L3_101_000G1_scaffold_387_11
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12115..12471)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6ERL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99461.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_101_000G1_scaffold_387_12
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12474..13964)
DNA (1491bp) protein (497aa)
L-threonine synthase (EC:4.2.3.1)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JNR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37413.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L3_101_000G1_scaffold_387_13
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13979..14470)
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=2 Tax=Lachnospiraceae RepID=F7JMW7_9FIRM
L3_101_000G1_scaffold_387_14
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14467..15744)
DNA (1278bp) protein (426aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Lachnospiraceae RepID=F7JNR1_9FIRM
L3_101_000G1_scaffold_387_15
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15881..17011)
DNA (1131bp) protein (377aa)
Sporulation integral membrane protein YtvI n=2 Tax=Lachnospiraceae RepID=F7JMW8_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EGN37416.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
sporulation integral membrane protein YtvI
L3_101_000G1_scaffold_387_16
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17029..17643)
DNA (615bp) protein (205aa)
Probable GTP-binding protein EngB n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JNR2_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L3_101_000G1_scaffold_387_17
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17673..20018)
DNA (2346bp) protein (782aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMW9_9FIRM
L3_101_000G1_scaffold_387_18
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20202..21473)
DNA (1272bp) protein (424aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Lachnospiraceae RepID=F7JNR3_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L3_101_000G1_scaffold_387_19
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21541..22122)
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Lachnospiraceae RepID=F7JMX0_9FIRM
L3_101_000G1_scaffold_387_20
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22166..23452)
DNA (1287bp) protein (429aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Trigger factor n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JNR4_9FIRM
trigger factor
L3_101_000G1_scaffold_387_21
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23712..24272)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EHS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99440.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
DJ-1 family protein
L3_101_000G1_scaffold_387_22
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24462..24917
DNA (456bp) protein (152aa)
Adenylate cyclase n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FBJ3_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:CDA99437.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
adenylate cyclase
L3_101_000G1_scaffold_387_23
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25044..25421
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EHR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99435.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Helix-turn-helix.
L3_101_000G1_scaffold_387_24
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25533..26741)
DNA (1209bp) protein (403aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Aspartokinase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMX4_9FIRM
aspartate kinase
L3_101_000G1_scaffold_387_25
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26743..27933)
DNA (1191bp) protein (397aa)
Proposed homoserine kinase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMX5_9FIRM
Proposed homoserine kinase {ECO:0000313|EMBL:EGN37426.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
proposed homoserine kinase
L3_101_000G1_scaffold_387_26
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27963..29180)
DNA (1218bp) protein (406aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMX6_9FIRM
L3_101_000G1_scaffold_387_27
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29257..30162)
DNA (906bp) protein (302aa)
Peptide chain release factor 2 n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMX7_9FIRM
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
bacterial peptide chain release factor 2 (bRF-2)
L3_101_000G1_scaffold_387_28
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30430..33006)
DNA (2577bp) protein (859aa)
Protein translocase subunit SecA n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMX8_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
protein translocase subunit secA
L3_101_000G1_scaffold_387_29
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33186..33968)
DNA (783bp) protein (261aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=2 Tax=Lachnospiraceae RepID=F7JMX9_9FIRM
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:CDA98229.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_387_30
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34107..34493)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37431.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Displaying items 1-30 of 48 in total

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