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L3_101_000G1_scaffold_531

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_531_1
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(181..516)
DNA (336bp) protein (112aa)
50S ribosomal protein L20 n=2 Tax=Lachnospiraceae RepID=F7JJ44_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
LSU ribosomal protein L20P
L3_101_000G1_scaffold_531_2
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(567..764)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Lachnospiraceae RepID=F7JJ45_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
LSU ribosomal protein L35P
L3_101_000G1_scaffold_531_3
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(821..1315)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=2 Tax=Lachnospiraceae RepID=F7JJ46_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
bacterial translation initiation factor 3 (bIF-3)
L3_101_000G1_scaffold_531_4
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1731..3065
DNA (1335bp) protein (445aa)
Transporter n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ47_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
sodium- and chloride- dependent transporter
L3_101_000G1_scaffold_531_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3180..4538
DNA (1359bp) protein (453aa)
Transporter n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ48_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Na+-dependent transporters of the SNF family
L3_101_000G1_scaffold_531_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4621..5484)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32081.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
EDD domain protein, DegV family
L3_101_000G1_scaffold_531_7
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5647..7014)
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32082.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Bacillus/Clostridium GerA spore germination protein.
L3_101_000G1_scaffold_531_8
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7086..7616)
DNA (531bp) protein (177aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32083.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L3_101_000G1_scaffold_531_9
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7671..8699)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32084.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L3_101_000G1_scaffold_531_10
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8741..10030)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32085.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Aspartate/tyrosine/aromatic aminotransferase
L3_101_000G1_scaffold_531_11
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10146..12974)
DNA (2829bp) protein (943aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32086.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L3_101_000G1_scaffold_531_12
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12943..15000)
DNA (2058bp) protein (686aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32087.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_531_13
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15055..16428)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EVY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01324.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_101_000G1_scaffold_531_14
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16729..16959)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EN09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01325.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_531_15
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16959..18257)
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32090.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
AraC family transcriptional regulator
L3_101_000G1_scaffold_531_16
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18276..19799)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EL65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01328.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_101_000G1_scaffold_531_17
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19989..20879)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EN13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01330.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_101_000G1_scaffold_531_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21104..22612)
DNA (1509bp) protein (503aa)
Glycosyl hydrolase family 43 n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9G6_9FIRM
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDC17359.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
xylA; XylA
L3_101_000G1_scaffold_531_19
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22626..23612)
DNA (987bp) protein (329aa)
xynB; Endo-1,4-beta-xylanase B (EC:3.2.1.8)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EN19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01335.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_531_20
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23635..26433)
DNA (2799bp) protein (933aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EX18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01336.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L3_101_000G1_scaffold_531_21
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26580..27809
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FH03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01337.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
AraC-type DNA-binding domain-containing protein
L3_101_000G1_scaffold_531_22
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27919..29346)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EVZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01339.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Na+/melibiose symporter and related transporters
L3_101_000G1_scaffold_531_23
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29371..31683)
DNA (2313bp) protein (771aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32101.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
glycosyl hydrolase family 3
L3_101_000G1_scaffold_531_24
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31737..34526)
DNA (2790bp) protein (930aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32102.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
alpha-L-rhamnosidase
L3_101_000G1_scaffold_531_25
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34837..35424)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32103.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_531_26
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35490..36854
DNA (1365bp) protein (455aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32104.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
NorM, Na+-driven multidrug efflux pump
L3_101_000G1_scaffold_531_27
unknown

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comp(36814..36915)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_101_000G1_scaffold_531_28
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36925..38247)
DNA (1323bp) protein (441aa)
bgl1A; beta-glucosidase Bgl1A (EC:3.2.1.21)
Beta-glucosidase Bgl1A {ECO:0000313|EMBL:ADL34422.1}; EC=3.2.1.21 {ECO:0000313|EMBL:ADL34422.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
glycoside hydrolase family 1 n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B4685E
L3_101_000G1_scaffold_531_29
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38285..40510)
DNA (2226bp) protein (742aa)
gh2E; glycoside hydrolase 2 (EC:3.2.1.-)
Glycoside hydrolase family 2 Gh2E {ECO:0000313|EMBL:ADL34424.1}; EC=3.2.1.- {ECO:0000313|EMBL:ADL34424.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
beta-galactosidase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B32545
L3_101_000G1_scaffold_531_30
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40748..42658)
DNA (1911bp) protein (637aa)
bglZ; BglZ (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LM74_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EET58289.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Displaying items 1-30 of 33 in total

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