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L3_101_000G1_scaffold_554

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_554_1
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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125..1570
DNA (1446bp) protein (482aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EHC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99300.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_554_2
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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1591..2202
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99299.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Guanylate kinase
L3_101_000G1_scaffold_554_3
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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2504..3499
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EFD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99298.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_101_000G1_scaffold_554_4
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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3503..4381
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FB50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99297.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Uncharacterized homolog of PSP1
L3_101_000G1_scaffold_554_5
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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4383..5093
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6ER36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99296.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Predicted O-methyltransferase
L3_101_000G1_scaffold_554_6
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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5098..5949
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EHC0_9FIRM
conserved hypothetical protein TIGR00096
L3_101_000G1_scaffold_554_7
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6278..6481
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37955.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_554_8
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6536..7189)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EQ21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99294.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_101_000G1_scaffold_554_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7439..8221
DNA (783bp) protein (261aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EFD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99293.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_554_10
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8237..8764)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6FB45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35238.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
spore maturation protein B
L3_101_000G1_scaffold_554_11
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8884..10890
DNA (2007bp) protein (669aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35237.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_554_12
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10887..11501
DNA (615bp) protein (205aa)
Spore maturation protein A n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EHB5_9FIRM
Spore maturation protein A {ECO:0000313|EMBL:CDA99290.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
nucleoside recognition domain containing protein
L3_101_000G1_scaffold_554_13
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11633..13579
DNA (1947bp) protein (649aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35234.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
L3_101_000G1_scaffold_554_14
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13554..14270
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JR99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35233.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
two component transcriptional regulator, AraC family
L3_101_000G1_scaffold_554_15
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14560..16014
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JR98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35232.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Cytosine/uracil/thiamine/allantoin permeases
L3_101_000G1_scaffold_554_16
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16171..17583
DNA (1413bp) protein (471aa)
dihydropyrimidinase (EC:3.5.2.2)
Dihydropyrimidinase n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EQY3_9FIRM
Dihydropyrimidinase {ECO:0000313|EMBL:CDA99236.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_554_17
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17629..18654
DNA (1026bp) protein (342aa)
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35230.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
L3_101_000G1_scaffold_554_18
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18684..19841
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EF84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99233.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
surface protein PspA
L3_101_000G1_scaffold_554_19
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19954..22704
DNA (2751bp) protein (917aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FAY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99232.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
calcium-translocating P-type ATPase, PMCA-type
L3_101_000G1_scaffold_554_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23003..25414
DNA (2412bp) protein (804aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XTL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98951.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_101_000G1_scaffold_554_21
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25429..28227
DNA (2799bp) protein (933aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FGZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01322.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L3_101_000G1_scaffold_554_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28261..29319
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32605.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L3_101_000G1_scaffold_554_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29306..30970
DNA (1665bp) protein (555aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSY4_9FIRM
putative sensor with HAMP domain
L3_101_000G1_scaffold_554_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30948..31736
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HXJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32879.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
AraC family transcriptional regulator
L3_101_000G1_scaffold_554_25
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31931..33475
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HT13_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ31539.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
L3_101_000G1_scaffold_554_26
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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33554..34498
DNA (945bp) protein (315aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B133_9CLOT
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AIQ70320.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
L3_101_000G1_scaffold_554_27
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34512..35414
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKW1_9FIRM
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AIQ31537.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
L3_101_000G1_scaffold_554_28
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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35585..37639
DNA (2055bp) protein (685aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Beta-galactosidase n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JRR8_9FIRM
beta-D-galactosidase
L3_101_000G1_scaffold_554_29
unknown

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37664..37777
DNA (114bp) protein (38aa)

This feature has no annotations

L3_101_000G1_scaffold_554_30
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38025..39380
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JR93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35227.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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