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L3_101_000G1_scaffold_1019

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000G1_scaffold_1019_1
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(358..633)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6E937_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34799.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_1019_2
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(650..1555)
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EID4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34798.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_1019_3
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1762..2478)
DNA (717bp) protein (239aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EB16_9FIRM
L3_101_000G1_scaffold_1019_4
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2512..3084)
DNA (573bp) protein (191aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EK52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97036.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_1019_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3105..3950)
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6F4W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34795.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L3_101_000G1_scaffold_1019_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4033..6546)
DNA (2514bp) protein (838aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=Lachnospiraceae RepID=F7JRQ7_9FIRM
L3_101_000G1_scaffold_1019_7
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6578..8515)
DNA (1938bp) protein (646aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EID8_9FIRM
L3_101_000G1_scaffold_1019_8
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8527..9612)
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=2 Tax=Lachnospiraceae RepID=R6EB17_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
recF protein
L3_101_000G1_scaffold_1019_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9654..9869)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EK55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97041.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_101_000G1_scaffold_1019_10
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10012..11121)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRQ3_9FIRM
L3_101_000G1_scaffold_1019_11
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11453..12823)
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Lachnospiraceae RepID=F7JRQ2_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
chromosomal replication initiator protein DnaA
L3_101_000G1_scaffold_1019_12
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13524..13865
DNA (342bp) protein (114aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EIE0_9FIRM
L3_101_000G1_scaffold_1019_13
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13956..14168
DNA (213bp) protein (71aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EB21_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
conserved hypothetical protein TIGR00278
L3_101_000G1_scaffold_1019_14
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14181..15449
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EK60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97046.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_101_000G1_scaffold_1019_15
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15490..16380
DNA (891bp) protein (297aa)
RNA-binding protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6F4X1_9FIRM
RNA-binding protein {ECO:0000313|EMBL:CDA97047.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Predicted RNA-binding protein
L3_101_000G1_scaffold_1019_16
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16494..17870
DNA (1377bp) protein (459aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
tRNA modification GTPase MnmE n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRP8_9FIRM
tRNA modification GTPase trmE
L3_101_000G1_scaffold_1019_17
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17836..19755
DNA (1920bp) protein (640aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EIE5_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
glucose-inhibited division protein A
L3_101_000G1_scaffold_1019_18
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19814..20536
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Lachnospiraceae RepID=F7JRP6_9FIRM
L3_101_000G1_scaffold_1019_19
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20594..21547)
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34779.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_1019_20
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21838..22608
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6F4X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97052.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
ATPases involved in chromosome partitioning
L3_101_000G1_scaffold_1019_21
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22608..23546
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6E953_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97053.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
ParB-like partition proteins
L3_101_000G1_scaffold_1019_22
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23566..24117
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34776.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_1019_23
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24140..25426
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=2 Tax=Lachnospiraceae RepID=F7JRP1_9FIRM
Seryl-tRNA synthetase {ECO:0000313|EMBL:CDA97055.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_1019_24
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25507..26382
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EK71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34774.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_1019_25
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26400..27476
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34773.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_101_000G1_scaffold_1019_26
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27473..28660
DNA (1188bp) protein (396aa)
glxK; putative glycerate kinase (EC:2.7.1.31)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6E956_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97058.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_101_000G1_scaffold_1019_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29123..30568)
DNA (1446bp) protein (482aa)
Site-specific recombinase, phage integrase family n=13 Tax=Firmicutes RepID=D5Q4P7_CLODI
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFH07103.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
Phage integrase family.
L3_101_000G1_scaffold_1019_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30587..30997)
DNA (411bp) protein (137aa)
DNA binding , excisionase family domain protein n=17 Tax=Firmicutes RepID=T3HWI2_CLODI
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFH07104.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
DNA binding domain, excisionase family
Displaying 28 items

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