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L3_101_000M1_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_8_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

424..1146
DNA (723bp) protein (241aa)
Spore cortex-lytic enzyme n=2 Tax=Clostridium RepID=A7VSA1_9CLOT
Spore cortex-lytic enzyme {ECO:0000313|EMBL:EDO61931.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
spore cortex-lytic protein
L3_101_000M1_scaffold_8_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1362..2018)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VS99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61929.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_8_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2074..3084)
DNA (1011bp) protein (337aa)
Oxidoreductase aldo/keto reductase family protein n=2 Tax=Clostridium RepID=R6N9W7_9CLOT
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDC05134.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
aldo/keto reductase
L3_101_000M1_scaffold_8_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3331..4461)
DNA (1131bp) protein (377aa)
Citrate transporter n=1 Tax=Clostridium leptum CAG:27 RepID=R6N276_9CLOT
Citrate transporter {ECO:0000313|EMBL:CDC05135.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
transporter, YbiR family
L3_101_000M1_scaffold_8_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4660..6096)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VS05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61834.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_8_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6579..7937)
DNA (1359bp) protein (453aa)
Oxidoreductase FAD/FMN-binding protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P5B7_9CLOT
Oxidoreductase FAD/FMN-binding protein {ECO:0000313|EMBL:CDC05137.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
NADH-flavin oxidoreductase
L3_101_000M1_scaffold_8_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7958..8773)
DNA (816bp) protein (272aa)
AP endonuclease, family 2 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VS01_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:EDO61831.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
AP endonuclease, family 2
L3_101_000M1_scaffold_8_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8849..9721)
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VS00_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC05139.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
binding-protein-dependent transporters inner membrane component
L3_101_000M1_scaffold_8_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9711..10574)
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VRZ9_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC05140.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ABC transporter permease
L3_101_000M1_scaffold_8_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10701..12056)
DNA (1356bp) protein (452aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=A7VRZ8_9CLOT
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDC05141.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
family 1 extracellular solute-binding protein
L3_101_000M1_scaffold_8_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12106..13089)
DNA (984bp) protein (328aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRZ7_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDO61827.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
oxidoreductase
L3_101_000M1_scaffold_8_12
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13520..14218)
DNA (699bp) protein (233aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium RepID=A7VRZ5_9CLOT
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDC05143.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
GntR family transcriptional regulator
L3_101_000M1_scaffold_8_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15221..15772
DNA (552bp) protein (184aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium leptum CAG:27 RepID=R6N9X5_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDC05144.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
acetyltransferase
L3_101_000M1_scaffold_8_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16021..16386
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61778.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_8_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16704..18182)
DNA (1479bp) protein (493aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Clostridium RepID=A7VRU7_9CLOT
L3_101_000M1_scaffold_8_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18772..20058)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRU5_9CLOT
L3_101_000M1_scaffold_8_17
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20075..20944)
DNA (870bp) protein (290aa)
ParB-like protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRU4_9CLOT
ParB-like protein {ECO:0000313|EMBL:EDO61774.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
spo0J; Stage 0 sporulation protein J
L3_101_000M1_scaffold_8_18
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21196..21960)
DNA (765bp) protein (255aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Clostridium RepID=A7VRU2_9CLOT
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:CDC05149.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
cobyrinic acid a,c-diamide synthase
L3_101_000M1_scaffold_8_19
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22543..23364)
DNA (822bp) protein (274aa)
ParB-like protein n=2 Tax=Clostridium RepID=A7VRT9_9CLOT
ParB-like protein {ECO:0000313|EMBL:CDC05150.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
noc; Nucleoid occlusion protein
L3_101_000M1_scaffold_8_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23469..24179)
DNA (711bp) protein (237aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium leptum CAG:27 RepID=R6NG19_9CLOT
L3_101_000M1_scaffold_8_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24468..26348)
DNA (1881bp) protein (627aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Clostridium RepID=A7VRT6_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
glucose-inhibited division protein A
L3_101_000M1_scaffold_8_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26439..27833)
DNA (1395bp) protein (465aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRT5_9CLOT
tRNA modification GTPase TrmE
L3_101_000M1_scaffold_8_23
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27942..28844)
DNA (903bp) protein (301aa)
R3H domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N9Y6_9CLOT
R3H domain protein {ECO:0000313|EMBL:CDC05154.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
single-stranded nucleic acid binding R3H domain-containing protein
L3_101_000M1_scaffold_8_24
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28862..29920)
DNA (1059bp) protein (353aa)
Membrane protein insertase YidC/Oxa1 family n=1 Tax=Clostridium leptum CAG:27 RepID=R6N294_9CLOT
Membrane protein insertase YidC/Oxa1 family {ECO:0000313|EMBL:CDC05155.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_101_000M1_scaffold_8_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29966..30211)
DNA (246bp) protein (82aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridium RepID=A7VRT2_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
conserved hypothetical protein TIGR00278
L3_101_000M1_scaffold_8_26
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30208..30552)
DNA (345bp) protein (115aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=2 Tax=Clostridium RepID=A7VRT1_9CLOT
L3_101_000M1_scaffold_8_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30726..30860)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Clostridium RepID=A7VRS9_9CLOT
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
LSU ribosomal protein L34P
L3_101_000M1_scaffold_8_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31189..32505
DNA (1317bp) protein (439aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Clostridium RepID=A7VRS7_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
chromosomal replication initiator protein DnaA
L3_101_000M1_scaffold_8_29
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32508..32738)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61756.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_8_30
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33066..34187
DNA (1122bp) protein (374aa)
DNA polymerase III subunit beta {ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00018259};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III, beta subunit n=2 Tax=Clostridium RepID=A7VRS4_9CLOT
Displaying items 1-30 of 169 in total

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