ggKbase home page

L3_101_000M1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 158 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_17_1
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..640
DNA (639bp) protein (213aa)
Glycosyl transferase family 4 n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9D9_9BACE
Glycosyl transferase family 4 {ECO:0000313|EMBL:EFV26584.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
glycosyl transferase, family 4, conserved region
L3_101_000M1_scaffold_17_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(655..2085)
DNA (1431bp) protein (477aa)
Type I restriction enzyme HsdR protein N-terminal domain protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V5C3_BACUN
Type I restriction enzyme HsdR protein N-terminal domain protein {ECO:0000313|EMBL:EDO53504.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_101_000M1_scaffold_17_3
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2280..4379)
DNA (2100bp) protein (700aa)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Bacteroides RepID=D2F1E6_9BACE
Prolyl oligopeptidase {ECO:0000313|EMBL:EFV26504.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_101_000M1_scaffold_17_4
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4441..5772)
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EGP8_9BACE
MATE efflux family protein {ECO:0000313|EMBL:CDE01855.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
MATE efflux family protein
L3_101_000M1_scaffold_17_5
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5875..7728)
DNA (1854bp) protein (618aa)
Membrane protein insertase YidC n=3 Tax=Bacteroides RepID=D2F1E4_9BACE
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
protein translocase subunit YidC
L3_101_000M1_scaffold_17_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7760..9379)
DNA (1620bp) protein (540aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HSI2_BACUN
L3_101_000M1_scaffold_17_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9411..9617
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7V5B7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY80088.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_101_000M1_scaffold_17_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9689..11089
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I0P2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS06990.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_101_000M1_scaffold_17_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11320..11739
DNA (420bp) protein (140aa)
Sigma-E factor negative regulatory protein RseC n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HT15_BACUN
Sigma-E factor negative regulatory protein RseC {ECO:0000313|EMBL:EOS06991.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
positive regulator of sigma(E), RseC/MucC
L3_101_000M1_scaffold_17_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11777..12679
DNA (903bp) protein (301aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V5B3_BACUN
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:EDO53494.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
electron transport complex, RnfABCDGE type, B subunit
L3_101_000M1_scaffold_17_11
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12740..14077
DNA (1338bp) protein (446aa)
Electron transport complex, RnfABCDGE type, C subunit n=6 Tax=root RepID=A7V5B2_BACUN
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
electron transport complex, RnfABCDGE type, C subunit
L3_101_000M1_scaffold_17_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14084..15076
DNA (993bp) protein (331aa)
Electron transport complex, RnfABCDGE type, D subunit n=8 Tax=root RepID=A7V5B1_BACUN
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
electron transport complex, RnfABCDGE type, D subunit
L3_101_000M1_scaffold_17_13
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15103..15738
DNA (636bp) protein (212aa)
Electron transport complex, RnfABCDGE type, G subunit n=7 Tax=Bacteroides RepID=A7V5B0_BACUN
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
electron transport complex, RnfABCDGE type, G subunit
L3_101_000M1_scaffold_17_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15773..16339
DNA (567bp) protein (189aa)
Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Bacteroides RepID=A7V5A9_BACUN
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
electron transport complex, RnfABCDGE type, E subunit
L3_101_000M1_scaffold_17_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16427..17011
DNA (585bp) protein (195aa)
Electron transport complex, RnfABCDGE type, A subunit n=7 Tax=Bacteroides RepID=A7V5A8_BACUN
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
electron transport complex, RnfABCDGE type, A subunit
L3_101_000M1_scaffold_17_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17143..18177
DNA (1035bp) protein (345aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=4 Tax=Bacteroides RepID=E5V9F3_9BACE
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFV26516.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_101_000M1_scaffold_17_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18788..20323
DNA (1536bp) protein (512aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
ATP synthase subunit beta n=7 Tax=Bacteroides RepID=A7V5A5_BACUN
ATP synthase F1 subunit beta
L3_101_000M1_scaffold_17_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20340..20591
DNA (252bp) protein (84aa)
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein n=7 Tax=Bacteroides RepID=D2F1D1_9BACE
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein {ECO:0000313|EMBL:EDO53485.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
ATP synthase F1 subunit epsilon
L3_101_000M1_scaffold_17_19
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20633..21052
DNA (420bp) protein (140aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7V5A3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA18741.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_101_000M1_scaffold_17_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21036..22106
DNA (1071bp) protein (357aa)
ATP synthase subunit a n=2 Tax=Bacteroides RepID=D2F1C9_9BACE
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ATP synthase subunit A
L3_101_000M1_scaffold_17_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22163..22420
DNA (258bp) protein (86aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit n=7 Tax=Bacteroides RepID=A7V5A1_BACUN
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_101_000M1_scaffold_17_22
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22516..23022
DNA (507bp) protein (169aa)
ATP synthase subunit b n=6 Tax=Bacteroides RepID=D2F1C7_9BACE
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ATP synthase F0 subunit B
L3_101_000M1_scaffold_17_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23034..23594
DNA (561bp) protein (187aa)
ATP synthase subunit delta n=7 Tax=Bacteroides RepID=A7V599_BACUN
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
ATP synthase F1 subunit delta
L3_101_000M1_scaffold_17_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23725..25311
DNA (1587bp) protein (529aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
ATP synthase subunit alpha n=6 Tax=Bacteroides RepID=A7V598_BACUN
ATP synthase F1 subunit alpha
L3_101_000M1_scaffold_17_25
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25428..26318
DNA (891bp) protein (297aa)
ATP synthase gamma chain n=2 Tax=Bacteroides RepID=D2F1C4_9BACE
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ATP synthase F1 subunit gamma
L3_101_000M1_scaffold_17_26
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26486..28702
DNA (2217bp) protein (739aa)
HRDC domain-containing protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9G3_9BACE
HRDC domain-containing protein {ECO:0000313|EMBL:EFV26526.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative helicase
L3_101_000M1_scaffold_17_27
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28734..29636)
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
RmlD substrate binding domain-containing protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9G4_9BACE
RmlD substrate binding domain-containing protein {ECO:0000313|EMBL:EFV26527.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_101_000M1_scaffold_17_28
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29662..30258)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V594_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26528.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_101_000M1_scaffold_17_29
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30359..31165)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HT36_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26529.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_101_000M1_scaffold_17_30
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31187..31906)
DNA (720bp) protein (240aa)
Response regulator receiver domain-containing protein n=2 Tax=Bacteroides RepID=E5V9G7_9BACE
Putative transcriptional regulatory protein RprY {ECO:0000313|EMBL:EFA18730.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
two component transcriptional regulator, winged helix family
Displaying items 1-30 of 158 in total

View Taxonomy