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L3_101_000M1_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_24_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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607..1542
DNA (936bp) protein (312aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N552_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCY99140.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
AraC-type DNA-binding domain-containing proteins
L3_101_000M1_scaffold_24_2
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1630..2142
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H0V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE31827.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_101_000M1_scaffold_24_3
unknown

Not on your lists

comp(1951..2406)
DNA (456bp) protein (152aa)

This feature has no annotations

L3_101_000M1_scaffold_24_4
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2463..3752
DNA (1290bp) protein (430aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Clostridiales RepID=D4LPI9_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE31826.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_101_000M1_scaffold_24_5
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3843..4742
DNA (900bp) protein (300aa)
ABC transporter permease protein n=2 Tax=Clostridiales RepID=R7GXJ4_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDE31825.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
lactose transport system (permease)
L3_101_000M1_scaffold_24_6
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4735..5565
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7GWQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE31824.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_101_000M1_scaffold_24_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5722..7746
DNA (2025bp) protein (675aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NB78_9FIRM
L3_101_000M1_scaffold_24_8
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7819..8934
DNA (1116bp) protein (372aa)
Phosphotransferase enzyme family protein n=2 Tax=Clostridiales RepID=U2EDM9_9FIRM
Phosphotransferase enzyme family {ECO:0000313|EMBL:CDE31822.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Phosphotransferase enzyme family.
L3_101_000M1_scaffold_24_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8974..11136
DNA (2163bp) protein (721aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=1 Tax=Blautia sp. KLE 1732 RepID=U2D230_9FIRM
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:ERI90830.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
conserved hypothetical protein TIGR02336
L3_101_000M1_scaffold_24_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11436..13103
DNA (1668bp) protein (556aa)
Signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RSP2_9CLOT
Signal transduction histidine kinase {ECO:0000313|EMBL:CCZ41614.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Signal transduction histidine kinase
L3_101_000M1_scaffold_24_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13250..13498
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90829.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_101_000M1_scaffold_24_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13663..14172
DNA (510bp) protein (170aa)
Acetyltransferase (GNAT) family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NB71_9FIRM
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CCY99124.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Acetyltransferase (GNAT) family.
L3_101_000M1_scaffold_24_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14394..15206
DNA (813bp) protein (271aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP16_9FIRM
L3_101_000M1_scaffold_24_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15250..16239
DNA (990bp) protein (330aa)
Guanosine polyphosphate pyrophosphohydrolases/synthetases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5R7_9FIRM
Guanosine polyphosphate pyrophosphohydrolases/synthetases {ECO:0000313|EMBL:CCY99118.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Guanosine polyphosphate pyrophosphohydrolases/synthetases
L3_101_000M1_scaffold_24_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16386..16877)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NB64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY99114.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_101_000M1_scaffold_24_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17341..18636
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NQ97_9FIRM
L3_101_000M1_scaffold_24_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18788..19564
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GYK5_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_101_000M1_scaffold_24_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19577..20314
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7GXM9_9FIRM
Putative O-antigen export system ATP-binding protein RfbB {ECO:0000313|EMBL:ERI90820.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ABC transporter-like protein
L3_101_000M1_scaffold_24_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20477..21220
DNA (744bp) protein (248aa)
NCAIR mutase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP04_9FIRM
NCAIR mutase {ECO:0000313|EMBL:CCY99106.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
NCAIR mutase (PurE)-related proteins
L3_101_000M1_scaffold_24_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21221..22549
DNA (1329bp) protein (443aa)
UPF0272 protein BN514_00896 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NQ89_9FIRM
UPF0272 protein BN514_00896 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
conserved hypothetical protein TIGR00299
L3_101_000M1_scaffold_24_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22659..23687
DNA (1029bp) protein (343aa)
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP01_9FIRM
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CCY99101.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_101_000M1_scaffold_24_22
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24144..25178
DNA (1035bp) protein (345aa)
5-dehydro-2-deoxygluconokinase (EC:2.7.1.92)
5-dehydro-2-deoxygluconokinase n=3 Tax=Clostridiales RepID=D4LPK4_9FIRM
Putative 5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:ERI90816.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_101_000M1_scaffold_24_23
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25197..27128
DNA (1932bp) protein (644aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:CBL18506.1}; EC=3.7.1.- {ECO:0000313|EMBL:CBL18506.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC:3.7.1.-)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=3 Tax=Clostridiales RepID=D4LPK5_9FIRM
L3_101_000M1_scaffold_24_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27145..27930
DNA (786bp) protein (262aa)
5-deoxyglucuronate isomerase (EC:5.3.1.-)
5-deoxyglucuronate isomerase {ECO:0000313|EMBL:CBL18507.1}; EC=5.3.1.- {ECO:0000313|EMBL:CBL18507.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
5-deoxyglucuronate isomerase n=2 Tax=Clostridiales RepID=D4LPK6_9FIRM
L3_101_000M1_scaffold_24_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27963..29114
DNA (1152bp) protein (384aa)
Alcohol dehydrogenase class IV n=2 Tax=root RepID=R5N5Q3_9FIRM
Alcohol dehydrogenase, class IV
Alcohol dehydrogenase class IV {ECO:0000313|EMBL:CCY99093.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_101_000M1_scaffold_24_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29238..30182
DNA (945bp) protein (315aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NQ79_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CCY99092.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type sugar transport system, periplasmic component
L3_101_000M1_scaffold_24_27
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30429..31796
DNA (1368bp) protein (456aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=3 Tax=Clostridiales RepID=D4LPK9_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CBL18510.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_101_000M1_scaffold_24_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31924..33663
DNA (1740bp) protein (580aa)
Histidine kinase-DNA gyrase B-and HSP90-like ATPase./Histidine kinase./HAMP domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NB45_9FIRM
Histidine kinase-DNA gyrase B-and HSP90-like ATPase./Histidine kinase./HAMP domain {ECO:0000313|EMBL:CCY99089.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
L3_101_000M1_scaffold_24_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33663..35249
DNA (1587bp) protein (529aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NQ75_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CCY99087.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_101_000M1_scaffold_24_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35331..36374
DNA (1044bp) protein (348aa)
Transcriptional regulators n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N512_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CCY99085.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Transcriptional regulators
Displaying items 1-30 of 133 in total

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