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L3_101_000M1_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_32_1
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

633..1319
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VR15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03930.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_101_000M1_scaffold_32_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1743..2039
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N6B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03929.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_101_000M1_scaffold_32_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2008..2784
DNA (777bp) protein (259aa)
ABC transporter permease protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MW05_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC03928.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
binding-protein-dependent transport system inner membrane protein
L3_101_000M1_scaffold_32_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2781..3845
DNA (1065bp) protein (355aa)
NMT1/THI5-like protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR18_9CLOT
NMT1/THI5-like protein {ECO:0000313|EMBL:EDO62140.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
NMT1/THI5-like domain-containing protein
L3_101_000M1_scaffold_32_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3856..4596
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=A7VR19_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC03926.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ABC transporter
L3_101_000M1_scaffold_32_6
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5097..5735
DNA (639bp) protein (213aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR21_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDO62143.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
cwlA; N-acetylmuramoyl-l-alanine amidase
L3_101_000M1_scaffold_32_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6244..6585)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=2 Tax=Clostridium RepID=A7VR23_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LSU ribosomal protein L17P
L3_101_000M1_scaffold_32_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6624..7577)
DNA (954bp) protein (318aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Clostridium RepID=A7VR24_9CLOT
L3_101_000M1_scaffold_32_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7657..8259)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=2 Tax=Clostridium RepID=A7VR25_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
rpsD; 30S ribosomal protein S4
L3_101_000M1_scaffold_32_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8280..8684)
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=2 Tax=Clostridium RepID=A7VR26_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
SSU ribosomal protein S11P
L3_101_000M1_scaffold_32_11
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8697..9065)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Clostridium RepID=A7VR27_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
SSU ribosomal protein S13P
L3_101_000M1_scaffold_32_12
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9232..9345)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Clostridium RepID=A7VR28_9CLOT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
rpmJ; ribosomal protein L36
L3_101_000M1_scaffold_32_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9360..9578)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Clostridium RepID=A7VR29_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_101_000M1_scaffold_32_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9598..9852)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VR30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03917.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_101_000M1_scaffold_32_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9870..10625)
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Clostridium RepID=A7VR31_9CLOT
L3_101_000M1_scaffold_32_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10629..11258)
DNA (630bp) protein (210aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=2 Tax=Clostridium RepID=A7VR32_9CLOT
L3_101_000M1_scaffold_32_17
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11284..12615)
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=2 Tax=Clostridium RepID=R6N698_9CLOT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
preprotein translocase subunit SecY
L3_101_000M1_scaffold_32_18
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12617..13057)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=Clostridium RepID=A7VR34_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LSU ribosomal protein L15P
L3_101_000M1_scaffold_32_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13077..13256)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=2 Tax=Clostridium RepID=A7VR35_9CLOT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
LSU ribosomal protein L30P
L3_101_000M1_scaffold_32_20
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13273..13776)
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=2 Tax=Clostridium RepID=A7VR36_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
rpsE; 30S ribosomal protein S5
L3_101_000M1_scaffold_32_21
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13794..14153)
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Clostridium RepID=A7VR37_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
50S ribosomal protein L18
L3_101_000M1_scaffold_32_22
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14173..14721)
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=2 Tax=Clostridium RepID=A7VR38_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LSU ribosomal protein L6P
L3_101_000M1_scaffold_32_23
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14734..15132)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Clostridium RepID=A7VR39_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
SSU ribosomal protein S8P
L3_101_000M1_scaffold_32_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15158..15343)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR40_9CLOT
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Ribosomal protein S14
L3_101_000M1_scaffold_32_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15356..15895)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Clostridium RepID=A7VR41_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Ribosomal protein L5
L3_101_000M1_scaffold_32_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15908..16228)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=2 Tax=Clostridium RepID=A7VR42_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
LSU ribosomal protein L24P
L3_101_000M1_scaffold_32_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16244..16612)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Clostridium RepID=A7VR43_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
LSU ribosomal protein L14P
L3_101_000M1_scaffold_32_28
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16686..16943)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Clostridium RepID=R6N688_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
30S ribosomal protein S17
L3_101_000M1_scaffold_32_29
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16963..17169)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=2 Tax=Clostridium RepID=A7VR45_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_101_000M1_scaffold_32_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17169..17594)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=2 Tax=Clostridium RepID=A7VR46_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LSU ribosomal protein L16P
Displaying items 1-30 of 162 in total

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