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L3_101_000M1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_45_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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216..1793
DNA (1578bp) protein (526aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72601.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Adenine specific DNA methylase Mod
L3_101_000M1_scaffold_45_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1809..4436
DNA (2628bp) protein (876aa)
DNA or RNA helicases of superfamily II n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXP6_9FIRM
DNA or RNA helicases of superfamily II
DNA or RNA helicases of superfamily II {ECO:0000313|EMBL:CBK98795.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_45_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4523..5107
DNA (585bp) protein (195aa)
TIGR02391 family protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S994_9FIRM
TIGR02391 family protein {ECO:0000313|EMBL:EDP22180.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_101_000M1_scaffold_45_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5173..6315
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YM82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54333.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_101_000M1_scaffold_45_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6427..6783
DNA (357bp) protein (119aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCN2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX73651.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
toxin-antitoxin system
L3_101_000M1_scaffold_45_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6780..7802
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73650.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_101_000M1_scaffold_45_7
Sutterella sp. CAG:521, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7799..8167
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:521 RepID=R7KLN9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDE75872.1}; TaxID=1262977 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:521.;"
Resolvase domain-containing protein
L3_101_000M1_scaffold_45_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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8228..9277
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73649.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Resolvase domain-containing protein
L3_101_000M1_scaffold_45_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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9595..9903
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72977.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_101_000M1_scaffold_45_10
unknown

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9960..10163
DNA (204bp) protein (68aa)

This feature has no annotations

L3_101_000M1_scaffold_45_11
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10325..12667
DNA (2343bp) protein (781aa)
Ferrous iron transport protein B n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3F8_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CDF45497.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
ferrous iron transporter FeoB
L3_101_000M1_scaffold_45_12
unknown

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12664..12831
DNA (168bp) protein (56aa)

This feature has no annotations

L3_101_000M1_scaffold_45_13
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12895..13344)
DNA (450bp) protein (150aa)
FeS cluster assembly scaffold protein NifU Clostridium type n=1 Tax=Clostridium sp. CAG:964 RepID=R6UD70_9CLOT
FeS cluster assembly scaffold protein NifU Clostridium type {ECO:0000313|EMBL:CDC78026.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L3_101_000M1_scaffold_45_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(13390..14670)
DNA (1281bp) protein (427aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YJN2_9FIRM
L3_101_000M1_scaffold_45_15
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15263..17278
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AH31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38666.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_101_000M1_scaffold_45_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17336..19312
DNA (1977bp) protein (659aa)
DHHA1 domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ACA1_9CLOT
DHHA1 domain protein {ECO:0000313|EMBL:CCX38667.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
L3_101_000M1_scaffold_45_17
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19380..19829
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Clostridium leptum CAG:27 RepID=R6NB67_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LSU ribosomal protein L9P
L3_101_000M1_scaffold_45_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19942..21321
DNA (1380bp) protein (460aa)
Replicative DNA helicase {ECO:0000313|EMBL:EJF38879.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EJF38879.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
primary replicative DNA helicase (EC:3.6.1.-)
DNA helicase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035FF9F4
L3_101_000M1_scaffold_45_19
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

21311..22663
DNA (1353bp) protein (451aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y401_9FIRM
L3_101_000M1_scaffold_45_20
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22697..23251
DNA (555bp) protein (185aa)
hprT; Hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AH37_9CLOT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCX38671.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_101_000M1_scaffold_45_21
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

23332..25305
DNA (1974bp) protein (658aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
ftsH1; ATP-dependent zinc metalloprotease FtsH 1 (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y9X1_9FIRM
L3_101_000M1_scaffold_45_22
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25411..27393
DNA (1983bp) protein (661aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.3)
DNA gyrase B subunit C-terminal domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7M4_9CLOT
DNA gyrase B subunit C-terminal domain protein {ECO:0000313|EMBL:CCX38673.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_101_000M1_scaffold_45_23
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27420..29648
DNA (2229bp) protein (743aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase/topoisomerase IV A subunit n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9W0_9CLOT
L3_101_000M1_scaffold_45_24
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

30005..30253
DNA (249bp) protein (83aa)
Preprotein translocase SecG subunit n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y7L3_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDD29905.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
protein translocase, SecG subunit
L3_101_000M1_scaffold_45_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30350..31381
DNA (1032bp) protein (344aa)
Cellulase M and related proteins (EC:3.2.1.4)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTX8_9CLOT
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EDO61624.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_45_26
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31374..32402
DNA (1029bp) protein (343aa)
Cellulase M and related proteins (EC:3.2.1.4)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QU07_9CLOT
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:CDC39350.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_101_000M1_scaffold_45_27
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32402..33115
DNA (714bp) protein (238aa)
FR47-like protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ADA7_9CLOT
FR47-like protein {ECO:0000313|EMBL:CCX37366.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_101_000M1_scaffold_45_28
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33057..34427
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003759757
Pyridoxal phosphate-dependent enzyme, methionine gamma-lyase family protein {ECO:0000313|EMBL:EJF41554.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
aluminum resistance family protein
L3_101_000M1_scaffold_45_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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34562..36661
DNA (2100bp) protein (700aa)
beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5N5_9FIRM
Beta-glucosidase {ECO:0000313|EMBL:EGN42933.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_101_000M1_scaffold_45_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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36806..38227
DNA (1422bp) protein (474aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YI80_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDD28266.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
Displaying items 1-30 of 119 in total

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