ggKbase home page

L3_101_000M1_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_53_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

678..1310
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XML9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24893.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1314..2402
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000366F5E3
Acetyltransferase fucose-4-O-acetylase {ECO:0000313|EMBL:CDD24892.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyltransferase, fucose-4-O-acetylase
L3_101_000M1_scaffold_53_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2380..3042)
DNA (663bp) protein (221aa)
Putative membrane protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XTA4_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDD24890.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


3443..3787
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XML3_9BACT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
50S ribosomal protein L20
L3_101_000M1_scaffold_53_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3861..5105
DNA (1245bp) protein (415aa)
major facilitator transporter n=1 Tax=Alistipes onderdonkii RepID=UPI0003792174
Major facilitator superfamily permease {ECO:0000313|EMBL:CDD24887.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
major facilitator superfamily permease
L3_101_000M1_scaffold_53_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5387..6328)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y869_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24886.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_7
unknown

Not on your lists

6392..6595
DNA (204bp) protein (68aa)

This feature has no annotations

L3_101_000M1_scaffold_53_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6622..7341
DNA (720bp) protein (240aa)
beta-lactamase n=1 Tax=Alistipes onderdonkii RepID=UPI000371194C
Zn-dependent hydrolase
Putative Zn-dependent hydrolase of beta-lactamase fold protein {ECO:0000313|EMBL:AFL76517.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_101_000M1_scaffold_53_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7505..7912)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003682FD4
Uncharacterized protein {ECO:0000313|EMBL:CDD24884.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8056..8622
DNA (567bp) protein (189aa)
RNA polymerase sigma factor n=1 Tax=Alistipes sp. CAG:29 RepID=R6XMK6_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RNA polymerase ECF-type sigma factor
L3_101_000M1_scaffold_53_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8606..9061
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z320_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24882.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_101_000M1_scaffold_53_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9302..9613)
DNA (312bp) protein (104aa)
Heavy metal-associated domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y864_9BACT
Heavy metal-associated domain protein {ECO:0000313|EMBL:CDD24881.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
copper chaperone
L3_101_000M1_scaffold_53_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9637..11973)
DNA (2337bp) protein (779aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Alistipes sp. CAG:29 RepID=R6XT95_9BACT
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CDD24880.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane receptor for ferrienterochelin and colicins
L3_101_000M1_scaffold_53_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12039..12452)
DNA (414bp) protein (138aa)
Conserved domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0U9_9BACT
Conserved domain protein {ECO:0000313|EMBL:CDD24879.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12499..12765)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XMK1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24878.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12840..14774
DNA (1935bp) protein (645aa)
RecQ familyATP-dependent DNA helicase n=1 Tax=Alistipes onderdonkii RepID=UPI0003647757
ATP-dependent DNA helicase RecQ family {ECO:0000313|EMBL:CDD24877.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RecQ familyATP-dependent DNA helicase
L3_101_000M1_scaffold_53_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14852..15475
DNA (624bp) protein (208aa)
Ribonuclease D n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y857_9BACT
Ribonuclease D {ECO:0000313|EMBL:CDD24876.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ribonuclease D
L3_101_000M1_scaffold_53_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15472..16671
DNA (1200bp) protein (400aa)
Putative SAM-dependent methyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XT91_9BACT
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CDD24875.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SAM-dependent methyltransferase
L3_101_000M1_scaffold_53_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16698..17057
DNA (360bp) protein (120aa)
Putative transcriptional regulator n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0U3_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:CDD24874.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L3_101_000M1_scaffold_53_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17349..18203)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XMJ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24873.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18760..20706)
DNA (1947bp) protein (649aa)
Membrane protein insertase YidC n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z311_9BACT
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
membrane protein insertase
L3_101_000M1_scaffold_53_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20747..22366)
DNA (1620bp) protein (540aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y851_9BACT
L3_101_000M1_scaffold_53_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22379..24598)
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XT86_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24870.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_101_000M1_scaffold_53_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24776..25447
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0T8_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD24869.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_101_000M1_scaffold_53_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25478..26569
DNA (1092bp) protein (364aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XMJ0_9BACT
L3_101_000M1_scaffold_53_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26576..27826
DNA (1251bp) protein (417aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z304_9BACT
L3_101_000M1_scaffold_53_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27934..28305
DNA (372bp) protein (124aa)
camphor resistance protein CrcB n=1 Tax=Alistipes onderdonkii RepID=UPI000377CD67
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
camphor resistance protein CrcB
L3_101_000M1_scaffold_53_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28318..29520
DNA (1203bp) protein (401aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetate kinase n=1 Tax=Alistipes onderdonkii RepID=UPI000367FF47
acetate kinase
L3_101_000M1_scaffold_53_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29540..30448
DNA (909bp) protein (303aa)
Phosphotransacetylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0T1_9BACT
Phosphotransacetylase {ECO:0000313|EMBL:CDD24864.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
phosphotransacetylase
L3_101_000M1_scaffold_53_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30495..31562
DNA (1068bp) protein (356aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
butyrate kinase (EC:2.7.2.7)
butyrate kinase n=1 Tax=Alistipes onderdonkii RepID=UPI00036583A6
Displaying items 1-30 of 143 in total

View Taxonomy