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L3_101_000M1_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_66_1
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39..734)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KLI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67700.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_101_000M1_scaffold_66_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(942..1148)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59775.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_66_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1160..1348)
DNA (189bp) protein (63aa)
DNA binding domain, excisionase family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYZ8_9CLOT
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDO59776.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
excisionase family DNA binding domain-containing protein
L3_101_000M1_scaffold_66_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2496..2729
DNA (234bp) protein (78aa)
DNA binding domain excisionase family n=1 Tax=Clostridium leptum CAG:27 RepID=R6N3D6_9CLOT
DNA binding domain excisionase family {ECO:0000313|EMBL:CDC05535.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_101_000M1_scaffold_66_5
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3204..4220
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F7A1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ01152.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_101_000M1_scaffold_66_6
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4279..4539
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59787.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_66_7
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4653..4991
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DX91_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ01154.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
MocB-like protein
L3_101_000M1_scaffold_66_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5006..5929
DNA (924bp) protein (308aa)
ParB-like protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DE94_CLOS4
ParB-like protein {ECO:0000313|EMBL:ERJ01155.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ParB-like partition proteins
L3_101_000M1_scaffold_66_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6059..7270
DNA (1212bp) protein (404aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDO59790.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Site-specific recombinase XerD
L3_101_000M1_scaffold_66_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8021..8467
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N0S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05553.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
cell wall hydrolase SleB
L3_101_000M1_scaffold_66_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8480..9022
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59793.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_101_000M1_scaffold_66_12
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9507..10445
DNA (939bp) protein (313aa)
Phosphate binding protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P6M7_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:CDC05557.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
phosphate binding protein
L3_101_000M1_scaffold_66_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10817..12157
DNA (1341bp) protein (447aa)
Phosphate ABC transporter, permease protein PstC n=2 Tax=Clostridium RepID=A7VZ19_9CLOT
Phosphate ABC transporter permease protein PstC {ECO:0000313|EMBL:CDC05558.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
pstC1; phosphate ABC transporter permease
L3_101_000M1_scaffold_66_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12150..13025
DNA (876bp) protein (292aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Clostridium leptum CAG:27 RepID=R6N3F5_9CLOT
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:CDC05560.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
phosphate ABC transporter permease
L3_101_000M1_scaffold_66_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13027..13785
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=A7VZ21_9CLOT
L3_101_000M1_scaffold_66_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13836..14501
DNA (666bp) protein (222aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Clostridium RepID=A7VZ22_9CLOT
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
phosphate transport system regulatory protein PhoU
L3_101_000M1_scaffold_66_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14522..15229
DNA (708bp) protein (236aa)
PhoP family transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI000369D630
DNA-binding response regulator MtrA {ECO:0000313|EMBL:EJF40602.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
phoB; transcriptional regulator
L3_101_000M1_scaffold_66_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15410..17155
DNA (1746bp) protein (582aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ40_9CLOT
signal transduction histidine kinase
L3_101_000M1_scaffold_66_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17308..18960)
DNA (1653bp) protein (551aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFX0_9CLOT
Recombinase {ECO:0000313|EMBL:KJF41282.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_101_000M1_scaffold_66_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18964..19299)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF41283.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_101_000M1_scaffold_66_21
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19596..19769
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDG6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82949.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_101_000M1_scaffold_66_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19864..20565
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRL3_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO62335.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
OmpR family two-component response regulator
L3_101_000M1_scaffold_66_23
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20552..21676
DNA (1125bp) protein (375aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRL2_9CLOT
L3_101_000M1_scaffold_66_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21797..22594
DNA (798bp) protein (266aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDO62333.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EDO62333.1};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRL1_9CLOT
hypothetical protein
L3_101_000M1_scaffold_66_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22896..23336
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YKD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41286.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_101_000M1_scaffold_66_26
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23326..23535
DNA (210bp) protein (70aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9UZI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF41287.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_101_000M1_scaffold_66_27
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24363..24854
DNA (492bp) protein (164aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium RepID=A7VZ42_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDC05593.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
MarR family transcripitonal regulator
L3_101_000M1_scaffold_66_28
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24928..26670
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=A7VZ43_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC05594.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ABC transporter
L3_101_000M1_scaffold_66_29
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26612..28555
DNA (1944bp) protein (648aa)
ABC transporter ATP-binding protein n=2 Tax=Clostridium RepID=R6N3I8_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC05595.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ABC transporter
L3_101_000M1_scaffold_66_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28923..29342
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VZ47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05596.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
Displaying items 1-30 of 99 in total

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