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L3_101_000M1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_85_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

650..2206
DNA (1557bp) protein (519aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSV5_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDO61251.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein predicted by Glimmer/Critica
L3_101_000M1_scaffold_85_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2322..3674)
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N0T3_9CLOT
L3_101_000M1_scaffold_85_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3671..4348)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NEI9_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO61253.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_101_000M1_scaffold_85_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4480..5460)
DNA (981bp) protein (327aa)
Peptidase propeptide and YPEB domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P3S5_9CLOT
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:CDC04622.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_101_000M1_scaffold_85_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5897..6109)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VSW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04624.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_101_000M1_scaffold_85_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7149..7280
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N0T6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04625.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_101_000M1_scaffold_85_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7687..8457)
DNA (771bp) protein (257aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSW7_9CLOT
L3_101_000M1_scaffold_85_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8450..9640)
DNA (1191bp) protein (397aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium leptum CAG:27 RepID=R6P3S9_9CLOT
L3_101_000M1_scaffold_85_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9637..10245)
DNA (609bp) protein (203aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=2 Tax=Clostridium RepID=A7VSW9_9CLOT
L3_101_000M1_scaffold_85_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10242..11024)
DNA (783bp) protein (261aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N8E4_9CLOT
L3_101_000M1_scaffold_85_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11021..12061)
DNA (1041bp) protein (347aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSX1_9CLOT
L3_101_000M1_scaffold_85_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12065..12634)
DNA (570bp) protein (190aa)
Glutamine amidotransferase, class I n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSX2_9CLOT
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EDO61268.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
anthranilate/para-aminobenzoate synthase component II, TrpG
L3_101_000M1_scaffold_85_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12631..14097)
DNA (1467bp) protein (489aa)
Chorismate binding enzyme n=1 Tax=Clostridium leptum CAG:27 RepID=R6P3T3_9CLOT
Chorismate binding enzyme {ECO:0000313|EMBL:CDC04632.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
anthranilate/para-aminobenzoate synthase component I, TrpE
L3_101_000M1_scaffold_85_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14344..14520)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MY27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04633.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_101_000M1_scaffold_85_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14982..15860
DNA (879bp) protein (293aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSX5_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDO61271.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein predicted by Glimmer/Critica
L3_101_000M1_scaffold_85_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16073..16699)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61272.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L3_101_000M1_scaffold_85_17
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16781..17680)
DNA (900bp) protein (300aa)
Transcriptional regulator LysR family n=1 Tax=Clostridium leptum CAG:27 RepID=R6NEK1_9CLOT
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC04636.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LysR family transcriptional regulator
L3_101_000M1_scaffold_85_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17820..18080
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61274.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_101_000M1_scaffold_85_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18100..19275
DNA (1176bp) protein (392aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EDO61275.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EDO61275.1};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSX9_9CLOT
iron-containing alcohol dehydrogenase
L3_101_000M1_scaffold_85_20
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19328..20194
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61276.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Protein of unknown function (DUF3737).
L3_101_000M1_scaffold_85_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20233..20949
DNA (717bp) protein (239aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSY1_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDO61277.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
aldo/keto reductase
L3_101_000M1_scaffold_85_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21058..21705
DNA (648bp) protein (216aa)
Flavin reductase {ECO:0000313|EMBL:EDO61278.1}; EC=1.7.-.- {ECO:0000313|EMBL:EDO61278.1};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Flavin reductase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSY2_9CLOT
Multimeric flavodoxin WrbA
L3_101_000M1_scaffold_85_23
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22007..22234)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61280.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_85_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22724..23116
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61283.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_101_000M1_scaffold_85_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23132..23614
DNA (483bp) protein (161aa)
Sigma-70 region 2 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSY8_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:EDO61284.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
RNA polymerase sigma factor, sigma-70 family
L3_101_000M1_scaffold_85_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23607..24374
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61285.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_101_000M1_scaffold_85_27
unknown

Not on your lists

comp(24261..24518)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_101_000M1_scaffold_85_28
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24799..24909
DNA (111bp) protein (37aa)
Streptothricin acetyl-transferase n=1 Tax=Clostridium leptum CAG:27 RepID=R6NEK8_9CLOT
Streptothricin acetyl-transferase {ECO:0000313|EMBL:CDC04646.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_101_000M1_scaffold_85_29
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24946..25317
DNA (372bp) protein (124aa)
Acetyltransferase n=1 Tax=Clostridium leptum CAG:27 RepID=R6P3U7_9CLOT
Acetyltransferase {ECO:0000313|EMBL:CDC04647.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_101_000M1_scaffold_85_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25402..26427)
DNA (1026bp) protein (342aa)
Dihydrodipicolinate reductase domain protein n=2 Tax=Clostridium RepID=A7VSZ0_9CLOT
Dihydrodipicolinate reductase domain protein {ECO:0000313|EMBL:CDC04648.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
dihydrodipicolinate reductase
Displaying items 1-30 of 104 in total

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