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L3_101_000M1_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_135_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..908)
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35783.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_101_000M1_scaffold_135_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1269..2063
DNA (795bp) protein (265aa)
Transcriptional regulator, IclR family protein n=3 Tax=Clostridiales RepID=G9YLD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35784.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L3_101_000M1_scaffold_135_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3386..3622)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32037.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L3_101_000M1_scaffold_135_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3935..4237
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM49945.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_101_000M1_scaffold_135_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4305..4574
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C218_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78103.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Phage-like protein endonuclease-like protein
L3_101_000M1_scaffold_135_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4671..4844
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BIZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78104.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_101_000M1_scaffold_135_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4984..5244
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C0S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78105.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000M1_scaffold_135_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5234..5452
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DEY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78106.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000M1_scaffold_135_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5575..5916
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM48566.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_101_000M1_scaffold_135_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5906..6157
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B634_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI73624.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000M1_scaffold_135_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6150..6575
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BN22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI73625.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_101_000M1_scaffold_135_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6731..7360)
DNA (630bp) protein (210aa)
Sigma-70, region 4 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRK8_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EHM49098.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
RNA polymerase sigma factor, sigma-70 family
L3_101_000M1_scaffold_135_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7551..7844)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM49097.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_101_000M1_scaffold_135_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8167..8544)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM49096.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_101_000M1_scaffold_135_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8729..11146)
DNA (2418bp) protein (806aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C941_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34914.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative P-loop ATPase
L3_101_000M1_scaffold_135_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(11143..11325)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87913.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_101_000M1_scaffold_135_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11444..11821
DNA (378bp) protein (126aa)
Phage transcriptional regulator, Cro/CI family protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp41 RepID=S2RS84_LACPA
Phage transcriptional regulator, Cro/CI family protein {ECO:0000313|EMBL:EPC74286.1}; TaxID=1256208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp41.;"
prophage LambdaBa04, DNA-binding protein
L3_101_000M1_scaffold_135_18
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11993..13174
DNA (1182bp) protein (394aa)
recombinase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B71886
Putative site-specific recombinase {ECO:0000313|EMBL:CDC68074.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative site-specific recombinase
L3_101_000M1_scaffold_135_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13537..14340
DNA (804bp) protein (268aa)
Copper amine oxidase domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56217.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative cell wall hydrolase
L3_101_000M1_scaffold_135_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14594..15409
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35786.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative cell wall hydrolase
L3_101_000M1_scaffold_135_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15628..16479
DNA (852bp) protein (284aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLD6_9FIRM
L3_101_000M1_scaffold_135_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16527..19184
DNA (2658bp) protein (886aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35788.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ftsK; cell division protein FtsK
L3_101_000M1_scaffold_135_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19190..19597
DNA (408bp) protein (136aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DAG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56221.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
bls; Blasticidin-S acetyltransferase
L3_101_000M1_scaffold_135_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19689..20870)
DNA (1182bp) protein (394aa)
NADPH-dependent butanol dehydrogenase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AT03_9CLOT
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:KGF56222.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Alcohol dehydrogenase, class IV
L3_101_000M1_scaffold_135_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21002..22360)
DNA (1359bp) protein (453aa)
Germination protein YpeB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6Q4_9FIRM
Germination protein YpeB {ECO:0000313|EMBL:EHO35790.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
germination protein YpeB
L3_101_000M1_scaffold_135_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22427..22990)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C574_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56224.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_101_000M1_scaffold_135_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23003..24487)
DNA (1485bp) protein (495aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=2 Tax=Clostridiales RepID=U2AQX2_9CLOT
L3_101_000M1_scaffold_135_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24635..25636
DNA (1002bp) protein (334aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLE3_9FIRM
L3_101_000M1_scaffold_135_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25658..26752
DNA (1095bp) protein (365aa)
Glycosyltransferase, group 4 family n=3 Tax=Clostridiales RepID=G9YLE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35794.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase
L3_101_000M1_scaffold_135_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26749..27897
DNA (1149bp) protein (383aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Clostridiales RepID=H1C6Q9_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ERI62522.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying items 1-30 of 101 in total

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