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L3_101_000M1_scaffold_151

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_151_1
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..418
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IYG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26995.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_101_000M1_scaffold_151_2
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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422..2596
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IYX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26996.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_101_000M1_scaffold_151_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2593..3684
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B757_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59757.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_101_000M1_scaffold_151_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3681..5084
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B613_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59756.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
glycosyltransferase
L3_101_000M1_scaffold_151_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(5368..6207)
DNA (840bp) protein (280aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Probable endonuclease 4 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0U6_9FIRM
endonuclease IV
L3_101_000M1_scaffold_151_6
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6211..6924)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6T4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37459.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
nitroreductase
L3_101_000M1_scaffold_151_7
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7097..7600
DNA (504bp) protein (168aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7A039_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD54143.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
MarR family transcriptional regulator
L3_101_000M1_scaffold_151_8
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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7708..8619
DNA (912bp) protein (304aa)
Transcriptional regulator, AraC family id=3649950 bin=GWC2_Clostridiales_40_7 species=Collinsella stercoris genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=GWC2_Clostridiales_40_7_curated
L3_101_000M1_scaffold_151_9
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8635..9687
DNA (1053bp) protein (351aa)
Oxidoreductase domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A313_9CLOT
Oxidoreductase domain protein {ECO:0000313|EMBL:CCX37460.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
oxidoreductase
L3_101_000M1_scaffold_151_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9719..10558
DNA (840bp) protein (280aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ADL4_9CLOT
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CCX37461.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
xylose isomerase domain-containing protein
L3_101_000M1_scaffold_151_11
unknown

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10555..10866
DNA (312bp) protein (104aa)

This feature has no annotations

L3_101_000M1_scaffold_151_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10988..11872
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37462.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_101_000M1_scaffold_151_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12007..12822
DNA (816bp) protein (272aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=1 Tax=Clostridium sp. D5 RepID=F0YVH9_9CLOT
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:ERI70579.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_101_000M1_scaffold_151_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12959..13543
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3L6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37463.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
HD domain.
L3_101_000M1_scaffold_151_15
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13558..14487
DNA (930bp) protein (310aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6T8_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX37464.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ABC transporter ATP-binding protein
L3_101_000M1_scaffold_151_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14468..15319
DNA (852bp) protein (284aa)
ABC-2 family transporter protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H5B8_9CLOT
ABC-2 family transporter protein {ECO:0000313|EMBL:EJF40453.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative ABC transporter, permease protein
L3_101_000M1_scaffold_151_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15309..16130
DNA (822bp) protein (274aa)
PHP domain protein {ECO:0000313|EMBL:EJF40450.1}; EC=3.1.3.- {ECO:0000313|EMBL:EJF40450.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
PHP domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4I0_9CLOT
Predicted metal-dependent phosphoesterases (PHP family)
L3_101_000M1_scaffold_151_18
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16145..16405
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIW0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23236.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_101_000M1_scaffold_151_19
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16842..18074
DNA (1233bp) protein (411aa)
DNA polymerase beta domain-containing protein region n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RNA2_9FIRM
DNA polymerase beta domain-containing protein region {ECO:0000313|EMBL:CDC49180.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_101_000M1_scaffold_151_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(18476..18937)
DNA (462bp) protein (154aa)
ACT domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YRC8_9FIRM
ACT domain protein {ECO:0000313|EMBL:CDD31126.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
amino acid-binding ACT protein
L3_101_000M1_scaffold_151_21
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18956..19711)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8W9_9CLOT
L3_101_000M1_scaffold_151_22
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19734..20624)
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
dapA; 4-hydroxy-tetrahydrodipicolinate synthase (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. CAG:964 RepID=R6UAN0_9CLOT
L3_101_000M1_scaffold_151_23
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(20649..21728)
DNA (1080bp) protein (360aa)
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YIA6_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDD31129.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_101_000M1_scaffold_151_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22193..23239
DNA (1047bp) protein (349aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N5T9_9CLOT
L3_101_000M1_scaffold_151_25
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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23262..24392
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y5E4_9FIRM
L3_101_000M1_scaffold_151_26
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24558..24845
DNA (288bp) protein (96aa)
Preprotein translocase YajC subunit n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A735_9CLOT
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CCX38990.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
preprotein translocase, YajC subunit
L3_101_000M1_scaffold_151_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

24927..25307
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YRF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD31161.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_101_000M1_scaffold_151_28
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25517..26335
DNA (819bp) protein (273aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium sp. CAG:964 RepID=R6VB22_9CLOT
L3_101_000M1_scaffold_151_29
unknown

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26404..26988
DNA (585bp) protein (195aa)

This feature has no annotations

L3_101_000M1_scaffold_151_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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27016..27924
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YID4_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
xerD; Tyrosine recombinase XerD
Displaying items 1-30 of 79 in total

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