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L3_101_000M1_scaffold_194

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_194_1
unknown

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3..68
DNA (66bp) protein (22aa)

This feature has no annotations

L3_101_000M1_scaffold_194_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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226..429
DNA (204bp) protein (68aa)
Sec-independent protein translocase protein TatA n=1 Tax=Alistipes sp. CAG:53 RepID=R5WX18_9BACT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
twin arginine-targeting protein translocase, TatA/E family
L3_101_000M1_scaffold_194_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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457..1362
DNA (906bp) protein (302aa)
Sec-independent protein translocase protein TatC n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INB5_9BACT
Twin arginine targeting (Tat) protein translocase TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1373..2629
DNA (1257bp) protein (419aa)
Predicted dehydrogenases and related proteins n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INB6_9BACT
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBK64428.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_5
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2692..5349)
DNA (2658bp) protein (886aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INB7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK64429.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein
L3_101_000M1_scaffold_194_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5362..7998)
DNA (2637bp) protein (879aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W1Q1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97023.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_101_000M1_scaffold_194_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8158..10059)
DNA (1902bp) protein (634aa)
Secreted protease n=1 Tax=Alistipes sp. CAG:53 RepID=R5WX16_9BACT
Secreted protease {ECO:0000313|EMBL:CCZ97022.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
FOG: PKD repeat
L3_101_000M1_scaffold_194_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10090..11010)
DNA (921bp) protein (307aa)
Metal-dependent hydrolase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WME2_9BACT
Metal-dependent hydrolase {ECO:0000313|EMBL:CCZ97021.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Metal-dependent hydrolase
L3_101_000M1_scaffold_194_9
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11026..12840)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W317_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97020.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RagB/SusD domain-containing protein
L3_101_000M1_scaffold_194_10
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12855..16358)
DNA (3504bp) protein (1168aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WA76_9BACT
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ97019.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_101_000M1_scaffold_194_11
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16460..17443)
DNA (984bp) protein (328aa)
Fe2+-dicitrate sensor, membrane component n=2 Tax=Alistipes RepID=D4INC0_9BACT
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor membrane component {ECO:0000313|EMBL:CCZ97018.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_101_000M1_scaffold_194_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17440..18030)
DNA (591bp) protein (197aa)
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INC1_9BACT
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 {ECO:0000313|EMBL:CBK64433.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18130..19224)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INC2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64434.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_14
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19272..20228)
DNA (957bp) protein (319aa)
Metal-dependent hydrolase n=2 Tax=Alistipes RepID=D4INC3_9BACT
Metal-dependent hydrolase {ECO:0000313|EMBL:CCZ97015.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Metal-dependent hydrolase
L3_101_000M1_scaffold_194_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20500..20862
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WA71_9BACT
Protein of unknown function (DUF3127).
Uncharacterized protein {ECO:0000313|EMBL:CBK64436.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20982..22094)
DNA (1113bp) protein (371aa)
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alistipes sp. CAG:53 RepID=R5W1P4_9BACT
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_101_000M1_scaffold_194_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22337..23041)
DNA (705bp) protein (235aa)
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBK64438.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INC6_9BACT
L3_101_000M1_scaffold_194_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23164..24546)
DNA (1383bp) protein (461aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Alistipes RepID=D4INC7_9BACT
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
sodium/proton antiporter, NhaA family (TC 2.A.33.1.1)
L3_101_000M1_scaffold_194_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24574..25614)
DNA (1041bp) protein (347aa)
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family (EC:3.5.3.11)
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family {ECO:0000313|EMBL:CBK64440.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CBK64440.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family n=2 Tax=Alistipes RepID=D4INC8_9BACT
L3_101_000M1_scaffold_194_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25707..26702
DNA (996bp) protein (332aa)
4-phosphoerythronate dehydrogenase (EC:1.1.1.290)
4-phosphoerythronate dehydrogenase n=2 Tax=Alistipes RepID=D4INC9_9BACT
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CCZ97009.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_101_000M1_scaffold_194_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26817..27998
DNA (1182bp) protein (394aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
dihydroorotate oxidase A (EC:1.3.98.1)
dihydroorotate oxidase n=1 Tax=Alistipes senegalensis RepID=UPI0002DD0871
L3_101_000M1_scaffold_194_22
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28007..29248
DNA (1242bp) protein (414aa)
CinA-like protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IND0_9BACT
competence/damage-inducible protein CinA C-terminal domain
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_23
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


29445..29678
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Alistipes sp. CAG:53 RepID=R5WX06_9BACT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
LSU ribosomal protein L28P
L3_101_000M1_scaffold_194_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


29695..29877
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=2 Tax=Alistipes RepID=D4IND3_9BACT
LSU ribosomal protein L33P
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_25
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29890..30048
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5W307_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ97005.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_101_000M1_scaffold_194_26
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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30170..31369
DNA (1200bp) protein (400aa)
Glycosyltransferase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IND5_9BACT
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBK64447.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_27
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31376..32611
DNA (1236bp) protein (412aa)
Glycosyltransferase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IND6_9BACT
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBK64448.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_101_000M1_scaffold_194_28
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32685..33617)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WX03_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97002.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_101_000M1_scaffold_194_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33971..34969
DNA (999bp) protein (333aa)
Signal recognition particle receptor FtsY n=2 Tax=Alistipes RepID=D4IND7_9BACT
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_101_000M1_scaffold_194_30
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34956..36254
DNA (1299bp) protein (433aa)
SSU ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Alistipes RepID=D4IND8_9BACT
Displaying items 1-30 of 57 in total

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