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L3_101_000M1_scaffold_525

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_525_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..2990
DNA (2988bp) protein (996aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1G5_BACV8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR39529.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_101_000M1_scaffold_525_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3014..4600
DNA (1587bp) protein (529aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9A1E5_BACVU
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS23330.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_101_000M1_scaffold_525_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4692..5945
DNA (1254bp) protein (418aa)
GTPase HflX n=7 Tax=Bacteroides RepID=A6L1G7_BACV8
GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_101_000M1_scaffold_525_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5959..7944
DNA (1986bp) protein (662aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L1G8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39532.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_101_000M1_scaffold_525_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8092..9999)
DNA (1908bp) protein (636aa)
Hydrolase CocE/NonD family protein n=4 Tax=Bacteroides RepID=C6Z4V2_9BACE
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:EET15966.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
glutaryl-7-ACA acylase
L3_101_000M1_scaffold_525_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10138..11781
DNA (1644bp) protein (548aa)
Anaerobic fumarate hydratase class I n=7 Tax=Bacteroides RepID=A6L1H0_BACV8
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:EOS03768.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
anaerobic fumarate hydratase class I
L3_101_000M1_scaffold_525_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11887..14040
DNA (2154bp) protein (718aa)
Glycoside hydrolase family 89 n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1H1_BACV8
glycoside hydrolase
Glycoside hydrolase family 89 {ECO:0000313|EMBL:ABR39535.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_101_000M1_scaffold_525_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14213..15871)
DNA (1659bp) protein (553aa)
Cationic amino acid transporter n=4 Tax=Bacteroides RepID=A6L1H2_BACV8
APA family basic amino acid/polyamine antiporter {ECO:0000313|EMBL:EOS03766.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
cationic amino acid transporter
L3_101_000M1_scaffold_525_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15960..17279)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein n=5 Tax=Bacteroides RepID=D4V4R5_BACVU
outer membrane protein TolC
Uncharacterized protein {ECO:0000313|EMBL:EOS03765.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_101_000M1_scaffold_525_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17276..20311)
DNA (3036bp) protein (1012aa)
Multidrug efflux membrane fusion protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1H4_BACV8
multidrug efflux membrane fusion protein
Multidrug efflux membrane fusion protein {ECO:0000313|EMBL:ABR39538.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_101_000M1_scaffold_525_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20331..21407)
DNA (1077bp) protein (359aa)
Efflux transporter, RND family, MFP subunit n=5 Tax=Bacteroides RepID=C6Z4U6_9BACE
membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY81561.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_101_000M1_scaffold_525_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21494..22513)
DNA (1020bp) protein (340aa)
Peptidase, M28 family n=3 Tax=Bacteroides RepID=C6Z4U5_9BACE
Peptidase M20/M25/M40 family protein {ECO:0000313|EMBL:KDS42633.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
aminopeptidase
L3_101_000M1_scaffold_525_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22527..23459)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Putative ribosome biogenesis GTPase RsgA n=6 Tax=root RepID=RSGA_BACV8
ribosome-associated GTPase
L3_101_000M1_scaffold_525_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23482..23571
DNA (90bp) protein (30aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UMH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS03760.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_101_000M1_scaffold_525_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23580..24140)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=14 Tax=Bacteroides RepID=RRF_BACV8
ribosome-recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_101_000M1_scaffold_525_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24379..25959
DNA (1581bp) protein (527aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L1H9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17952.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_101_000M1_scaffold_525_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26362..26880
DNA (519bp) protein (173aa)
Phosphoglycerate mutase family protein n=2 Tax=Bacteroides vulgatus RepID=D4V4S2_BACVU
phosphoglycerate mutase
Histidine phosphatase super family protein {ECO:0000313|EMBL:KDS23314.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_101_000M1_scaffold_525_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26903..30160)
DNA (3258bp) protein (1086aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1I1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39545.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_101_000M1_scaffold_525_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30185..32293)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L1I2_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS42625.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_101_000M1_scaffold_525_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32348..33586)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HIK7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03754.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_101_000M1_scaffold_525_21
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33844..34554)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
Uridylate kinase n=13 Tax=Bacteroides RepID=PYRH_BACV8
pyrH; uridylate kinase
L3_101_000M1_scaffold_525_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34593..35918)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=5 Tax=Bacteroides RepID=C6Z4T6_9BACE
MATE efflux family protein {ECO:0000313|EMBL:KDS42622.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
DNA-damage-inducible protein F
L3_101_000M1_scaffold_525_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36077..36526
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UY46_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81549.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Displaying 23 items

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