ggKbase home page

L3_101_000M1_scaffold_637

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_637_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

157..750
DNA (594bp) protein (198aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6KWK7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04084.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_101_000M1_scaffold_637_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

753..1751
DNA (999bp) protein (333aa)
Toxin-antitoxin system, toxin component, Fic family n=4 Tax=Bacteroides RepID=D4V8S7_BACVU
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ABR37820.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_101_000M1_scaffold_637_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1719..1934)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZQ34_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18958.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_101_000M1_scaffold_637_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2100..3779)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8S6_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17739.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_101_000M1_scaffold_637_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3858..5288
DNA (1431bp) protein (477aa)
Carbon starvation protein A n=5 Tax=Bacteroides RepID=A6KWK4_BACV8
carbon starvation protein A
Carbon starvation CstA family protein {ECO:0000313|EMBL:KDS54631.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_101_000M1_scaffold_637_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5275..5496
DNA (222bp) protein (74aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6KWK3_BACV8
membrane protein
Putative membrane protein {ECO:0000313|EMBL:KDS26376.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_101_000M1_scaffold_637_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5515..6006
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8S3_BACVU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17736.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_101_000M1_scaffold_637_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6116..8422)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZQ39_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY77675.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
beta-N-acetylhexosaminidase
L3_101_000M1_scaffold_637_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8479..9510)
DNA (1032bp) protein (344aa)
Endonuclease/exonuclease/phosphatase family protein n=11 Tax=Bacteroides RepID=C3R8E1_9BACE
endonuclease/exonuclease/phosphatase
Uncharacterized protein {ECO:0000313|EMBL:EIY77676.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_101_000M1_scaffold_637_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9756..12557)
DNA (2802bp) protein (934aa)
Excinuclease ABC subunit A n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HS78_BACVU
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
UvrABC SOS-repair system protein excinuclease A
L3_101_000M1_scaffold_637_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12639..14138
DNA (1500bp) protein (500aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z334_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY77678.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
secreted protein
L3_101_000M1_scaffold_637_12
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14425..14997)
DNA (573bp) protein (191aa)
Chromate transport protein n=7 Tax=Bacteroides RepID=A6KWJ7_BACV8
chromate transport protein
Chromate transporter {ECO:0000313|EMBL:EFV66105.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_101_000M1_scaffold_637_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14994..15542)
DNA (549bp) protein (183aa)
Chromate transport protein n=7 Tax=Bacteroides RepID=C6Z332_9BACE
chromate transport protein
Chromate ion transporter (CHR) family chromate transporter {ECO:0000313|EMBL:EIY77680.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_101_000M1_scaffold_637_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15547..19563)
DNA (4017bp) protein (1339aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJW9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04071.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_101_000M1_scaffold_637_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19641..23345)
DNA (3705bp) protein (1235aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HS73_BACVU
L3_101_000M1_scaffold_637_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23496..24155
DNA (660bp) protein (220aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A6KWJ3_BACV8
hypothetical protein
LysE type translocator family protein {ECO:0000313|EMBL:KDS54619.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_101_000M1_scaffold_637_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24227..24769
DNA (543bp) protein (181aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3R8D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04068.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_101_000M1_scaffold_637_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24784..25641
DNA (858bp) protein (286aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KDS26374.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KDS26374.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8R2_BACVU
dTDP-4-dehydrorhamnose reductase
L3_101_000M1_scaffold_637_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25648..27216
DNA (1569bp) protein (523aa)
Peptide chain release factor 3 n=7 Tax=Bacteroides RepID=A6KWJ0_BACV8
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_101_000M1_scaffold_637_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27291..28073)
DNA (783bp) protein (261aa)
DnaJ domain protein n=7 Tax=Bacteroides RepID=A6KWI9_BACV8
DnaJ domain-containing protein
DnaJ like chaperone {ECO:0000313|EMBL:EOS04065.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_101_000M1_scaffold_637_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28180..29064
DNA (885bp) protein (295aa)
Lactate dehydrogenase and related dehydrogenase n=5 Tax=Bacteroides RepID=A6KWI8_BACV8
lactate dehydrogenase-like protien
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein {ECO:0000313|EMBL:KDS26473.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_101_000M1_scaffold_637_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29047..29835)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3R6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18977.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_101_000M1_scaffold_637_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30132..31211
DNA (1080bp) protein (360aa)
Putative lipoprotein n=2 Tax=Bacteroides vulgatus RepID=A6KWI6_BACV8
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:KDS54612.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_101_000M1_scaffold_637_24
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31776..35294)
DNA (3519bp) protein (1173aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LIC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83294.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
two-component system sensor histidine kinase/response regulator
L3_101_000M1_scaffold_637_25
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35440..37113
DNA (1674bp) protein (558aa)
Lipolytic enzyme G-D-S-L family n=1 Tax=Bacteroides clarus CAG:160 RepID=R6L6X4_9BACE
Lipolytic enzyme G-D-S-L family {ECO:0000313|EMBL:CDB83293.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
lysophospholipase L1-like esterase
L3_101_000M1_scaffold_637_26
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37130..37453
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6MBD4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83292.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_101_000M1_scaffold_637_27
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37695..38063
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6MBD4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83292.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
polysaccharide deacetylase
L3_101_000M1_scaffold_637_28
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38122..40212)
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LM52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83291.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
L3_101_000M1_scaffold_637_29
unknown

Not on your lists

comp(40323..40469)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_101_000M1_scaffold_637_30
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40559..40696)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LBV7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83290.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
Displaying items 1-30 of 39 in total

View Taxonomy