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L3_101_000M1_scaffold_377

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_377_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(1..114)
DNA (114bp) protein (38aa)
Na+/H+ antiporter NhaC n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENS7_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:CDB02253.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_101_000M1_scaffold_377_2
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(535..660)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QK58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36155.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L3_101_000M1_scaffold_377_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(676..954)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99735.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_101_000M1_scaffold_377_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1275..1631
DNA (357bp) protein (119aa)
Immunity repressor protein n=2 Tax=Clostridium botulinum RepID=C3KZS3_CLOB6
immunity repressor protein
Immunity protein {ECO:0000313|EMBL:KIN81902.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_101_000M1_scaffold_377_5
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1634..2269
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NK83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06646.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L3_101_000M1_scaffold_377_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2543..2749)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09783.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_101_000M1_scaffold_377_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2739..3188)
DNA (450bp) protein (150aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEK1_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDS09784.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA-directed RNA polymerase specialized sigma subunit
L3_101_000M1_scaffold_377_8
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3749..4510)
DNA (762bp) protein (254aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWN9_TEPAE
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CCP25527.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L3_101_000M1_scaffold_377_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4507..5127)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEK5_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS09788.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
TetR family transcriptional regulator
L3_101_000M1_scaffold_377_10
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5454..5708
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60063.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_101_000M1_scaffold_377_11
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5716..6141
DNA (426bp) protein (142aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFX0_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG29749.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_101_000M1_scaffold_377_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6594..7355)
DNA (762bp) protein (254aa)
Cupin domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3DI77_CLODI
Cupin domain protein {ECO:0000313|EMBL:EQF26255.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
AraC family transcriptional regulator
L3_101_000M1_scaffold_377_13
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7604..8290
DNA (687bp) protein (229aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P1Q0_9FIRM
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CCZ03566.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
L3_101_000M1_scaffold_377_14
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8247..8462
DNA (216bp) protein (72aa)
methylphosphotriester-DNA alkyltransferase (EC:2.1.1.-)
Methylated-DNA--protein-cysteine S-methyltransferase n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6K9H9_9BACE
Methylated-DNA--protein-cysteine S-methyltransferase {ECO:0000313|EMBL:CDB71808.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
L3_101_000M1_scaffold_377_15
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

8482..8841
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HJ52_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26721.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
antibiotic biosynthesis monooxygenase
L3_101_000M1_scaffold_377_16
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8844..9377
DNA (534bp) protein (178aa)
ogt1; Methylated-DNA-[protein]-cysteineS-methyltransfe rase 1 (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase DNA binding domain protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JS40_9PROT
6-O-methylguanine DNA methyltransferase DNA binding domain protein {ECO:0000313|EMBL:CDB52922.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
L3_101_000M1_scaffold_377_17
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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9374..10153
DNA (780bp) protein (260aa)
Methyltransferase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EP57_9FIRM
Methyltransferase {ECO:0000313|EMBL:CDA91767.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
methyltransferase type 11
L3_101_000M1_scaffold_377_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11126..11359
DNA (234bp) protein (78aa)
TnpX site-specific recombinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBT9_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:EDS11064.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Resolvase domain
L3_101_000M1_scaffold_377_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11433..12629
DNA (1197bp) protein (399aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFX0_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG29749.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_101_000M1_scaffold_377_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(12922..13491)
DNA (570bp) protein (190aa)
UPF0340 protein BN497_01678 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJR9_9FIRM
UPF0340 protein BN497_01678 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
conserved hypothetical protein TIGR01440
L3_101_000M1_scaffold_377_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(13504..14754)
DNA (1251bp) protein (417aa)
Adenosylhomocysteinase {ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|RuleBase:RU000548};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENY2_9FIRM
L3_101_000M1_scaffold_377_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(14784..16619)
DNA (1836bp) protein (612aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYS3_9FIRM
glucosamine--fructose-6-phosphate aminotransferase
L3_101_000M1_scaffold_377_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(16629..17978)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Phosphoglucosamine mutase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQU7_9FIRM
phosphoglucosamine mutase
L3_101_000M1_scaffold_377_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(17994..19184)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02311.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_101_000M1_scaffold_377_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(19171..20016)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02312.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_101_000M1_scaffold_377_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(20198..20725)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02313.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
sigma 54 modulation protein/ribosomal protein S30EA
L3_101_000M1_scaffold_377_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21040..21768)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02314.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ComF family protein
L3_101_000M1_scaffold_377_28
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21770..23506)
DNA (1737bp) protein (579aa)
helicase, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQV0_9FIRM
RecD/TraA family helicase {ECO:0000313|EMBL:CDB02315.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_101_000M1_scaffold_377_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(23580..24902)
DNA (1323bp) protein (441aa)
PolyA polymerase family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZV7_9FIRM
PolyA polymerase family protein {ECO:0000313|EMBL:CDB02316.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
papS; poly(A) polymerase
L3_101_000M1_scaffold_377_30
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(24902..25873)
DNA (972bp) protein (324aa)
yhaM; 3'-5' exoribonuclease YhaM (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02317.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Displaying items 1-30 of 46 in total

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