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L3_101_000M1_scaffold_930

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_930_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(3..980)
DNA (978bp) protein (326aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit (EC:6.3.5.2)
GMP synthase 2 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERE1_9FIRM
L3_101_000M1_scaffold_930_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(1081..2589)
DNA (1509bp) protein (503aa)
inosine 5-monophosphate dehydrogenase (EC:1.1.1.205)
IMP dehydrogenase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FM79_9FIRM
IMP dehydrogenase {ECO:0000313|EMBL:CDB03172.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_101_000M1_scaffold_930_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(2796..4430)
DNA (1635bp) protein (545aa)
60 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FM76_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
groEL; chaperonin GroEL
L3_101_000M1_scaffold_930_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(4450..4725)
DNA (276bp) protein (92aa)
10 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F2E5_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
groES; co-chaperonin GroES
L3_101_000M1_scaffold_930_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(4888..5733)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ETC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03165.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
8-oxoguanine DNA glycosylase
L3_101_000M1_scaffold_930_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(5742..6554)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F196_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03164.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_101_000M1_scaffold_930_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

6650..6820
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03163.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ferredoxin
L3_101_000M1_scaffold_930_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(6929..7558)
DNA (630bp) protein (210aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FM71_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
CoA-binding domain-containing protein
L3_101_000M1_scaffold_930_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(7687..7914)
DNA (228bp) protein (76aa)
Acyl carrier protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F2E0_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
acpP; acyl carrier protein
L3_101_000M1_scaffold_930_10
unknown

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comp(7911..8045)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_101_000M1_scaffold_930_11
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(8024..9949)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DP81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89410.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
ABC transporter-like protein
L3_101_000M1_scaffold_930_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists


comp(9959..10972)
DNA (1014bp) protein (338aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F191_9FIRM
O-sialoglycoprotein endopeptidase
L3_101_000M1_scaffold_930_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10969..11430)
DNA (462bp) protein (154aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERD0_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDB03158.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
RimI3; acetyltransferase
L3_101_000M1_scaffold_930_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(11455..12162)
DNA (708bp) protein (236aa)
tRNA threonylcarbamoyl adenosine modification protein YeaZ n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FM66_9FIRM
tRNA threonylcarbamoyl adenosine modification protein YeaZ {ECO:0000313|EMBL:CDB03157.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_101_000M1_scaffold_930_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(12150..12578)
DNA (429bp) protein (143aa)
tRNA threonylcarbamoyl adenosine modification protein YjeE n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F2D6_9FIRM
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:CDB03156.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
conserved hypothetical nucleotide-binding protein
L3_101_000M1_scaffold_930_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(12581..13123)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ETB8_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_101_000M1_scaffold_930_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(13425..14861)
DNA (1437bp) protein (479aa)
dipeptidase PepV (EC:3.4.13.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F189_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03154.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_101_000M1_scaffold_930_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(14864..15085)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03153.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
NifU domain-containing protein
L3_101_000M1_scaffold_930_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(15106..16440)
DNA (1335bp) protein (445aa)
Receptor family ligand-binding protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FM63_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:CDB03152.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Leu/Ile/Val-binding protein
L3_101_000M1_scaffold_930_20
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(16455..17159)
DNA (705bp) protein (235aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DP69_9FIRM
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA89400.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
branched-chain amino acid ABC transporter ATP-binding protein
L3_101_000M1_scaffold_930_21
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(17159..17998)
DNA (840bp) protein (280aa)
sugar ABC transporter ATPase (EC:3.6.3.17)
ABC-type branched-chain amino acid transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DWY2_9FIRM
ABC-type branched-chain amino acid transport system ATPase component {ECO:0000313|EMBL:CDA89399.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
L3_101_000M1_scaffold_930_22
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(18000..19196)
DNA (1197bp) protein (399aa)
ABC-type branched-chain amino acid transport system permease component n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DLK1_9FIRM
ABC-type branched-chain amino acid transport system permease component {ECO:0000313|EMBL:CDA89398.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
branched-chain amino acid ABC transporter permease protein
L3_101_000M1_scaffold_930_23
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(19206..20090)
DNA (885bp) protein (295aa)
Branched-chain amino acid ABC-type transport system permease component n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DYK3_9FIRM
Branched-chain amino acid ABC-type transport system permease component {ECO:0000313|EMBL:CDA89396.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
branched-chain amino acid ABC transporter permease protein
L3_101_000M1_scaffold_930_24
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(20288..21460)
DNA (1173bp) protein (391aa)
ABC-type branched-chain amino acid transport system periplasmic component n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DWX7_9FIRM
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:CDA89394.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
branched-chain amino acid ABC transporter branched-chain amino acid-binding protein
L3_101_000M1_scaffold_930_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21670..22254
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HM47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29229.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Rubrerythrin
Displaying 25 items

View Taxonomy