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L3_101_000M1_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_70_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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193..684
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Clostridium sp. CAG:81 RepID=R5G8J6_9CLOT
L3_101_000M1_scaffold_70_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

671..1945
DNA (1275bp) protein (425aa)
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027, ECO:0000313|EMBL:CBL41740.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV98_9FIRM
L3_101_000M1_scaffold_70_3
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2089..3453)
DNA (1365bp) protein (455aa)
Putative efflux protein, MATE family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV97_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL41739.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3440..3886)
DNA (447bp) protein (149aa)
Transcriptional regulators n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV96_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL41738.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4198..4749)
DNA (552bp) protein (184aa)
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV95_9FIRM
L3_101_000M1_scaffold_70_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4749..6938)
DNA (2190bp) protein (730aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CBL41736.1}; EC=1.17.4.2 {ECO:0000313|EMBL:CBL41736.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G983_9CLOT
L3_101_000M1_scaffold_70_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7520..8392)
DNA (873bp) protein (291aa)
Fe-S oxidoreductase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV92_9FIRM
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:CBL41734.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8413..9957)
DNA (1545bp) protein (515aa)
AAA domain (Dynein-related subfamily) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV91_9FIRM
AAA domain (dynein-related subfamily).
AAA domain (Dynein-related subfamily) {ECO:0000313|EMBL:CBL41733.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_9
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9961..11325)
DNA (1365bp) protein (455aa)
Uncharacterized protein conserved in bacteria n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV90_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL41732.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_10
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11360..12334)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FXA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09443.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_101_000M1_scaffold_70_11
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12384..13787)
DNA (1404bp) protein (468aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:81 RepID=R5FWK1_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CCY09445.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
putative efflux protein, MATE family
L3_101_000M1_scaffold_70_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13929..14915)
DNA (987bp) protein (329aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CBL41729.1}; EC=1.4.1.16 {ECO:0000313|EMBL:CBL41729.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Diaminopimelate dehydrogenase n=2 Tax=Clostridiales RepID=D7GV87_9FIRM
L3_101_000M1_scaffold_70_13
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15078..15356)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D4N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75133.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L3_101_000M1_scaffold_70_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15340..15555)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N8X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09879.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
DNA-binding protein
L3_101_000M1_scaffold_70_15
unknown

Not on your lists

comp(15561..15980)
DNA (420bp) protein (140aa)

This feature has no annotations

L3_101_000M1_scaffold_70_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16123..16707)
DNA (585bp) protein (195aa)
Peptidase S54 family n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACP5_9CLOT
Peptidase S54 family {ECO:0000313|EMBL:CDD56100.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
peptidase
L3_101_000M1_scaffold_70_17
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16704..17930)
DNA (1227bp) protein (409aa)
Toxic anion resistance protein TelA n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L3S7_BLAHA
Toxic anion resistance protein TelA {ECO:0000313|EMBL:EEX23237.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
toxic anion resistance family protein
L3_101_000M1_scaffold_70_18
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17946..19631)
DNA (1686bp) protein (562aa)
Transglutaminase-like superfamily protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N2E9_SLAHD
transglutaminase-like superfamily protein
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:ACV21455.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_101_000M1_scaffold_70_19
unknown

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comp(19667..20206)
DNA (540bp) protein (180aa)

This feature has no annotations

L3_101_000M1_scaffold_70_20
unknown

Not on your lists

comp(20265..20786)
DNA (522bp) protein (174aa)

This feature has no annotations

L3_101_000M1_scaffold_70_21
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20912..21664)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JIP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY54210.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
OmpA/MotB domain-containing protein
L3_101_000M1_scaffold_70_22
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21693..23768)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETP71720.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L3_101_000M1_scaffold_70_23
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24045..25361)
DNA (1317bp) protein (439aa)
Na+-driven multidrug efflux pump n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV86_9FIRM
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CBL41728.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_24
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25464..26156)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV85_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41727.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_25
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26276..27142)
DNA (867bp) protein (289aa)
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Clostridiales RepID=D7GV84_9FIRM
L3_101_000M1_scaffold_70_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27272..28087)
DNA (816bp) protein (272aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase, TatD family {ECO:0000313|EMBL:CBL41725.1}; EC=3.1.21.- {ECO:0000313|EMBL:CBL41725.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Hydrolase, TatD family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV83_9FIRM
L3_101_000M1_scaffold_70_27
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28131..28862)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G9B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09457.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
TraX protein.
L3_101_000M1_scaffold_70_28
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28920..30896)
DNA (1977bp) protein (659aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G0P1_9CLOT
L3_101_000M1_scaffold_70_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31216..31344)
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV81_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41723.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_70_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31614..33335
DNA (1722bp) protein (574aa)
Uncharacterized conserved protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV77_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL41719.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
hypothetical protein
Displaying items 1-30 of 92 in total

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