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L3_101_000M1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_200_1
unknown

Not on your lists

comp(259..423)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_101_000M1_scaffold_200_2
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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577..1377
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RU09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC48824.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
putative amidohydrolase
L3_101_000M1_scaffold_200_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1415..2077)
DNA (663bp) protein (221aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium sp. CAG:81 RepID=R5G7V5_9CLOT
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
phosphate uptake regulator, PhoU
L3_101_000M1_scaffold_200_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2080..2841)
DNA (762bp) protein (254aa)
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000313|EMBL:CBL41098.1};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTF6_9FIRM
L3_101_000M1_scaffold_200_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2907..3788)
DNA (882bp) protein (294aa)
Phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1) n=1 Tax=Clostridium sp. CAG:81 RepID=R5FZB8_9CLOT
Phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CCY08979.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L3_101_000M1_scaffold_200_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3789..4727)
DNA (939bp) protein (313aa)
Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTF4_9FIRM
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CBL41096.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_200_7
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4891..5844)
DNA (954bp) protein (318aa)
Phosphate ABC transporter substrate-binding protein PhoT family (TC 3.A.1.7.1) n=1 Tax=Clostridium sp. CAG:81 RepID=R5G941_9CLOT
Phosphate ABC transporter substrate-binding protein PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CCY08981.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_101_000M1_scaffold_200_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6233..8002)
DNA (1770bp) protein (590aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTF2_9FIRM
cell envelope-related function transcriptional attenuator common domain
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CBL41094.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_200_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8019..9467)
DNA (1449bp) protein (483aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Clostridium sp. CAG:81 RepID=R5FVZ1_9CLOT
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CCY08983.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Undecaprenyl-phosphate glucose phosphotransferase
L3_101_000M1_scaffold_200_10
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9767..10753)
DNA (987bp) protein (329aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:81 RepID=R5FZC4_9CLOT
Predicted glycosyltransferases {ECO:0000313|EMBL:CCY08984.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted glycosyltransferases
L3_101_000M1_scaffold_200_11
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10750..12948)
DNA (2199bp) protein (733aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:81 RepID=R5FV51_9CLOT
Predicted glycosyltransferases {ECO:0000313|EMBL:CCY08985.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted glycosyltransferases
L3_101_000M1_scaffold_200_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12945..13907)
DNA (963bp) protein (321aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.83)
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL41091.1}; EC=2.4.1.83 {ECO:0000313|EMBL:CBL41091.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTE9_9FIRM
L3_101_000M1_scaffold_200_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14172..15125)
DNA (954bp) protein (318aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTE8_9FIRM
Nucleoside-diphosphate-sugar epimerases
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CBL41090.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_200_14
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15283..17259)
DNA (1977bp) protein (659aa)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] (EC:2.2.1.6)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase pyruvate dehydrogenase (Cytochrome) glyoxylate carboligase phosphonopyruvate decarboxylase] n=1 Tax=Clostridium sp. CAG:81 RepID=R5FVZ7_9CLOT
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase pyruvate dehydrogenase (Cytochrome) glyoxylate carboligase phosphonopyruvate decarboxylase] {ECO:0000313|EMBL:CCY08988.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_200_15
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17616..18944
DNA (1329bp) protein (443aa)
Putative cell wall binding repeat n=1 Tax=Clostridium sp. CAG:81 RepID=R5FZD1_9CLOT
Putative cell wall binding repeat {ECO:0000313|EMBL:CCY08989.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Putative cell wall binding repeat.
L3_101_000M1_scaffold_200_16
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19086..19232)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5FV58_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY08990.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_200_17
unknown

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comp(19257..19430)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_101_000M1_scaffold_200_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19449..20240)
DNA (792bp) protein (264aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTE3_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL41085.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_200_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20252..21487)
DNA (1236bp) protein (412aa)
Trigger factor n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTE2_9FIRM
trigger factor
Trigger factor {ECO:0000256|RuleBase:RU003914, ECO:0000313|EMBL:CBL41084.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_200_20
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21697..22836
DNA (1140bp) protein (380aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G988_9CLOT
Glycerate kinase {ECO:0000313|EMBL:CCY09006.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_200_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23047..23298)
DNA (252bp) protein (84aa)
FeoA domain n=2 Tax=Clostridiales RepID=D7GTC7_9FIRM
FeoA domain.
FeoA domain {ECO:0000313|EMBL:CCY09010.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_200_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23425..24570)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56937.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Cysteine-rich secretory protein family./Putative cell wall binding repeat.
L3_101_000M1_scaffold_200_23
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24923..27643)
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G393_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10354.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Putative cell wall binding repeat.
L3_101_000M1_scaffold_200_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27921..30470)
DNA (2550bp) protein (850aa)
Glucan-binding domain (YG repeat)-like protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RL17_9CLOT
Glucan-binding domain (YG repeat)-like protein {ECO:0000313|EMBL:CDC48450.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Putative cell wall binding repeat.
L3_101_000M1_scaffold_200_25
unknown

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30626..30865
DNA (240bp) protein (80aa)

This feature has no annotations

L3_101_000M1_scaffold_200_26
unknown

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comp(30840..31487)
DNA (648bp) protein (216aa)

This feature has no annotations

L3_101_000M1_scaffold_200_27
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31950..33143)
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Clostridium sp. CAG:81 RepID=R5G995_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_200_28
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33284..35362)
DNA (2079bp) protein (693aa)
Elongation factor G n=1 Tax=Clostridium sp. CAG:81 RepID=R5FW49_9CLOT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
elongation factor G
L3_101_000M1_scaffold_200_29
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(35426..35941)
DNA (516bp) protein (172aa)
30S ribosomal protein S7 n=1 Tax=Clostridium sp. CAG:81 RepID=R5FVD0_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
30S ribosomal protein S7
L3_101_000M1_scaffold_200_30
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(36153..36572)
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=2 Tax=Clostridiales RepID=D7GTC5_9FIRM
SSU ribosomal protein S12P
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Displaying items 1-30 of 51 in total

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