ggKbase home page

L3_101_000M1_scaffold_1494

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_1494_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..661
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PG60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK42744.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
L3_101_000M1_scaffold_1494_2
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(795..1379)
DNA (585bp) protein (195aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GFE8_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CCY11256.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted membrane protein
L3_101_000M1_scaffold_1494_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1379..1474)
DNA (96bp) protein (32aa)
Predicted membrane protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVI7_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CCY11256.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_1494_4
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1956..2525)
DNA (570bp) protein (190aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Sortase and related acyltransferases n=1 Tax=Clostridium sp. CAG:81 RepID=R5GEP6_9CLOT
Sortase and related acyltransferases {ECO:0000313|EMBL:CCY11257.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_1494_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2708..3622
DNA (915bp) protein (305aa)
Predicted permeases n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5U4_9CLOT
Predicted permeases {ECO:0000313|EMBL:CCY11259.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted permeases
L3_101_000M1_scaffold_1494_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3612..4286)
DNA (675bp) protein (225aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:81 RepID=R5GFF3_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY11261.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Transcriptional regulator
L3_101_000M1_scaffold_1494_7
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4609..5718
DNA (1110bp) protein (370aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G2A3_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCY11263.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
aldo/keto reductase
L3_101_000M1_scaffold_1494_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5740..6270
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVJ1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41833.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_1494_9
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6434..7402)
DNA (969bp) protein (323aa)
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBL41834.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBL41834.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L-lactate dehydrogenase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVJ2_9FIRM
L3_101_000M1_scaffold_1494_10
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7689..9203)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GFF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11266.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_101_000M1_scaffold_1494_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9200..10042)
DNA (843bp) protein (281aa)
rRNA methylases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVJ4_9FIRM
rRNA methylases
rRNA methylases {ECO:0000313|EMBL:CBL41836.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_1494_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10225..11595
DNA (1371bp) protein (457aa)
Putative efflux protein, MATE family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVJ5_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL41837.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_101_000M1_scaffold_1494_13
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11592..11948)
DNA (357bp) protein (119aa)
Cupin domain n=1 Tax=Clostridium sp. CAG:81 RepID=R5GE28_9CLOT
Cupin domain {ECO:0000313|EMBL:CCY11022.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Cupin domain.
L3_101_000M1_scaffold_1494_14
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12078..13088)
DNA (1011bp) protein (337aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1T0_9CLOT
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:CCY11023.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_101_000M1_scaffold_1494_15
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13566..14168)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5G171_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11025.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
Displaying 15 items

View Taxonomy