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L3_101_000M1_scaffold_2292

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_2292_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..367
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9F1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74031.1}; Flags: Fragment;; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glucosamine-fructose-6-phosphate aminotransferase
L3_101_000M1_scaffold_2292_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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462..878
DNA (417bp) protein (139aa)
PTS system fructose IIA component n=2 Tax=Collinsella RepID=A4EBY5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74030.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system fructose subfamily transporter subunit IIA
L3_101_000M1_scaffold_2292_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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895..1365
DNA (471bp) protein (157aa)
PTS system sorbose subfamily IIB component n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9M7_CLOSW
PTS system sorbose subfamily transporter subunit IIB
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:ADL04077.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_101_000M1_scaffold_2292_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1374..2165
DNA (792bp) protein (264aa)
Phosphotransferase system PTS sorbose-specific IIC subunit n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9M8_CLOSW
PTS system sorbose-specific transporter subunit IIC
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:ADL04078.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_101_000M1_scaffold_2292_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2155..2991
DNA (837bp) protein (279aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9M9_CLOSW
PTS system mannose/fructose/sorbose family transporter subunit IID
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:ADL04079.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_101_000M1_scaffold_2292_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3075..3911
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=uncultured Collinsella sp. SMG3 RepID=H6WNP3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74183.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Xylose isomerase domain-containing protein TIM barrel
L3_101_000M1_scaffold_2292_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4081..5796
DNA (1716bp) protein (572aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBZ1_9ACTN
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_101_000M1_scaffold_2292_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5902..7338
DNA (1437bp) protein (479aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBZ2_9ACTN
L3_101_000M1_scaffold_2292_9
uncultured Collinsella sp. SMG3, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7340..8455
DNA (1116bp) protein (372aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1131819 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="uncultured Collinsella sp. SMG3.;"
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=uncultured Collinsella sp. SMG3 RepID=H6WNN9_9ACTN
L3_101_000M1_scaffold_2292_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8456..9043
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBZ4_9ACTN
Displaying 10 items

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