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L3_101_000M1_scaffold_109

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_109_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3..1154)
DNA (1152bp) protein (384aa)
Peptidase dimerization domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72594.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptidase M20
L3_101_000M1_scaffold_109_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1212..1997)
DNA (786bp) protein (262aa)
Putative molybdenum cofactor biosynthesis protein C n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72593.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter ATP-binding protein
L3_101_000M1_scaffold_109_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2020..3168)
DNA (1149bp) protein (383aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72592.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polar amino acid ABC transporter inner membrane subunit
L3_101_000M1_scaffold_109_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3178..4104)
DNA (927bp) protein (309aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72591.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter substrate-binding protein
L3_101_000M1_scaffold_109_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4368..5261)
DNA (894bp) protein (298aa)
Aldose 1-epimerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6L4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72590.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aldose-1-epimerase
L3_101_000M1_scaffold_109_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5341..6210)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFL8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35354.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_109_7
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6370..7317)
DNA (948bp) protein (316aa)
NUDIX hydrolase n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N9Z3_CORGP
NUDIX hydrolase
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|SAAS:SAAS00231155}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_101_000M1_scaffold_109_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7464..8729
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z935_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72588.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
major facilitator superfamily protein
L3_101_000M1_scaffold_109_9
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8942..10312
DNA (1371bp) protein (457aa)
AAA domain protein n=1 Tax=Olsenella profusa F0195 RepID=U2T3M6_9ACTN
AAA domain protein {ECO:0000313|EMBL:ERL07664.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
ATPase
L3_101_000M1_scaffold_109_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10346..10792
DNA (447bp) protein (149aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM48_9ACTN
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA35356.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_109_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10925..11254)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39148.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_109_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11247..12071)
DNA (825bp) protein (275aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Pyridoxal kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE3_9ACTN
pyridoxal/pyridoxine/pyridoxamine kinase
L3_101_000M1_scaffold_109_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12570..13076
DNA (507bp) protein (169aa)
Transcriptional regulator, MarR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE2_9ACTN
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EBA39146.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
MarR family transcripitonal regulator
L3_101_000M1_scaffold_109_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13069..14883
DNA (1815bp) protein (605aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z960_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35375.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_101_000M1_scaffold_109_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14876..16795
DNA (1920bp) protein (640aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72653.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_101_000M1_scaffold_109_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16976..18124)
DNA (1149bp) protein (383aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBD4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72651.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
diguanylate cyclase (GGDEF) domain
L3_101_000M1_scaffold_109_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18188..19099)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC7_9ACTN
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EBA39131.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LysR family transcriptional regulator
L3_101_000M1_scaffold_109_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19300..20181
DNA (882bp) protein (294aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.36)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC6_9ACTN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EBA39130.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_101_000M1_scaffold_109_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20248..21504
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC5_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA39129.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_109_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21574..22614
DNA (1041bp) protein (347aa)
NAD-dependent oxidoreductase (EC:1.1.1.179)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC4_9ACTN
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EBA39128.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_101_000M1_scaffold_109_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23026..25173
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D1Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72695.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_101_000M1_scaffold_109_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25556..26260)
DNA (705bp) protein (235aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
translaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB7_9ACTN
L3_101_000M1_scaffold_109_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26454..27281)
DNA (828bp) protein (276aa)
HAD hydrolase, family IIB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72693.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Haloacid dehalogenase domain-containing protein hydrolase type 3
L3_101_000M1_scaffold_109_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27357..29915
DNA (2559bp) protein (853aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB5_9ACTN
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_101_000M1_scaffold_109_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30010..30723)
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=2 Tax=Collinsella RepID=A4EBB4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72691.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_101_000M1_scaffold_109_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30728..32353)
DNA (1626bp) protein (542aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB3_9ACTN
L3_101_000M1_scaffold_109_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32465..32689)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3Y1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35847.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_109_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32721..34748)
DNA (2028bp) protein (676aa)
Probable potassium transport system protein kup n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB1_9ACTN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
potassium transporter
L3_101_000M1_scaffold_109_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34907..35782)
DNA (876bp) protein (292aa)
Nitroreductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB0_9ACTN
Nitroreductase family protein {ECO:0000313|EMBL:EBA39114.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
nitroreductase
L3_101_000M1_scaffold_109_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35996..38296
DNA (2301bp) protein (767aa)
Arylsulfatase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1R0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72712.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sulfatase
Displaying items 1-30 of 72 in total

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