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L3_101_000M1_scaffold_196

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Displaying items 1-30 of 58 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_196_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

240..1232
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40244.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_196_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1214..1987
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40243.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_196_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2098..3024
DNA (927bp) protein (309aa)
Sortase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M6_9ACTN
Sortase family protein {ECO:0000313|EMBL:EBA40242.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
srtE; fimbrial associated sortase-like protein
L3_101_000M1_scaffold_196_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3329..3640
DNA (312bp) protein (104aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit {ECO:0000313|EMBL:EBA40241.1}; EC=6.3.5.- {ECO:0000313|EMBL:EBA40241.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M5_9ACTN
L3_101_000M1_scaffold_196_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3640..5154
DNA (1515bp) protein (505aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M4_9ACTN
L3_101_000M1_scaffold_196_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5154..6830
DNA (1677bp) protein (559aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZG13_9ACTN
L3_101_000M1_scaffold_196_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7174..8538
DNA (1365bp) protein (455aa)
ATPase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3I2_9ACTN
ATPase {ECO:0000313|EMBL:CDA35692.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATPase
L3_101_000M1_scaffold_196_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8603..9601)
DNA (999bp) protein (333aa)
Transcriptional regulator AraC family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMW8_9ACTN
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDA35691.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative AraC-type DNA-binding domain-containing protein
L3_101_000M1_scaffold_196_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9722..11548
DNA (1827bp) protein (609aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M1_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA40237.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
multidrug ABC transporter ATPase and permease
L3_101_000M1_scaffold_196_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11549..13306
DNA (1758bp) protein (586aa)
ABC-type multidrug transport system, ATPase and permease components (EC:3.6.3.42)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGK4_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35689.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_196_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13494..13739
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7M1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35688.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_101_000M1_scaffold_196_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13758..15833
DNA (2076bp) protein (692aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EBA40234.1}; EC=3.6.3.- {ECO:0000313|EMBL:EBA40234.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Heavy metal translocating P-type ATPase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L7_9ACTN
heavy metal translocating P-type ATPase
L3_101_000M1_scaffold_196_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15928..16326
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40232.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_101_000M1_scaffold_196_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16347..16838
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75578.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_101_000M1_scaffold_196_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16897..17331)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40229.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_101_000M1_scaffold_196_16
unknown

Not on your lists

comp(17855..18427)
DNA (573bp) protein (191aa)

This feature has no annotations

L3_101_000M1_scaffold_196_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18612..19490
DNA (879bp) protein (293aa)
Phospholipase, patatin family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L2_9ACTN
Phospholipase, patatin family {ECO:0000313|EMBL:EBA40228.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
patatin
L3_101_000M1_scaffold_196_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


19684..20127
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=2 Tax=Collinsella RepID=R5ZMW0_9ACTN
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
50S ribosomal protein L13
L3_101_000M1_scaffold_196_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


20130..20525
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA04_9ACTN
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S9P
L3_101_000M1_scaffold_196_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20649..21986
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8K9_9ACTN
L3_101_000M1_scaffold_196_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22058..22555
DNA (498bp) protein (166aa)
PTS system glucose subfamily IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7L3_9ACTN
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CDA35678.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Glc family PTS system transporter subunit IIA
L3_101_000M1_scaffold_196_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22827..23555
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3G7_9ACTN
glucosamine-6-phosphate isomerase
L3_101_000M1_scaffold_196_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24005..27001
DNA (2997bp) protein (999aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMV7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35676.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
SARP family transcriptional regulator
L3_101_000M1_scaffold_196_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27071..27370)
DNA (300bp) protein (100aa)
Putative RNA-binding protein, YhbY family n=2 Tax=Collinsella RepID=A4E8K5_9ACTN
Putative RNA-binding protein, YhbY family {ECO:0000313|EMBL:EBA40221.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_196_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27529..28254)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGJ4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35674.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ubiquinone/menaquinone biosynthesis methylase
L3_101_000M1_scaffold_196_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28251..28409)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8K3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40219.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_101_000M1_scaffold_196_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28734..30098)
DNA (1365bp) protein (455aa)
UPF0210 protein COLAER_00743 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8K2_9ACTN
UPF0210 protein HMPREF9463_00480 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_101_000M1_scaffold_196_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30207..32765)
DNA (2559bp) protein (853aa)
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8K1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75590.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methionine synthase (B12-dependent)
L3_101_000M1_scaffold_196_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32775..33563)
DNA (789bp) protein (263aa)
Vitamin B12 dependent methionine synthase, activation domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8K0_9ACTN
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EBA40216.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
vitamin B12 dependent methionine synthase
L3_101_000M1_scaffold_196_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33563..34435)
DNA (873bp) protein (291aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Methylenetetrahydrofolate reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8J9_9ACTN
5,10-methylenetetrahydrofolate reductase
Displaying items 1-30 of 58 in total

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