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L3_101_000M1_scaffold_414

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_414_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9K9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75191.1}; Flags: Fragment;; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_101_000M1_scaffold_414_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(173..658)
DNA (486bp) protein (162aa)
CarD-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU3_9ACTN
CarD-like protein {ECO:0000313|EMBL:EBA39260.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_414_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(671..838)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH12_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35884.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_414_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


1001..2854
DNA (1854bp) protein (618aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=2 Tax=Collinsella RepID=A4EAU4_9ACTN
L3_101_000M1_scaffold_414_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3381..5945
DNA (2565bp) protein (855aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Transcription termination factor Rho n=2 Tax=Collinsella RepID=R5ZND9_9ACTN
transcription termination factor Rho
L3_101_000M1_scaffold_414_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6256..7656
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A421_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35887.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_101_000M1_scaffold_414_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7664..8113
DNA (450bp) protein (150aa)
VanZ-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75223.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
VanZ family protein
L3_101_000M1_scaffold_414_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8228..9118)
DNA (891bp) protein (297aa)
fructokinase (EC:2.7.1.4)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH19_9ACTN
ROK family protein {ECO:0000313|EMBL:CDA35889.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_414_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9260..10441)
DNA (1182bp) protein (394aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAV0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75288.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_101_000M1_scaffold_414_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11047..11907)
DNA (861bp) protein (287aa)
DNA-damage-inducible protein D n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB14_9ACTN
DNA-damage-inducible protein D {ECO:0000313|EMBL:EBA39331.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_414_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12069..13595)
DNA (1527bp) protein (509aa)
FAD binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB15_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72833.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L3_101_000M1_scaffold_414_12
unknown

Not on your lists

comp(13571..13759)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_101_000M1_scaffold_414_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13852..14856)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB16_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39333.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_414_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14875..15609)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB17_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39334.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
NifU-like domain-containing protein
L3_101_000M1_scaffold_414_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16013..16822
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72830.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transposase
L3_101_000M1_scaffold_414_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16888..17322)
DNA (435bp) protein (145aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB20_9ACTN
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EBA39337.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
nitrogen-fixing protein NifU
L3_101_000M1_scaffold_414_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17315..18640)
DNA (1326bp) protein (442aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase, SufS subfamily n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB21_9ACTN
L3_101_000M1_scaffold_414_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18637..19908)
DNA (1272bp) protein (424aa)
SufB/sufD domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A434_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72827.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
SufBD protein
L3_101_000M1_scaffold_414_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19908..21320)
DNA (1413bp) protein (471aa)
FeS assembly protein SufB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB23_9ACTN
FeS assembly protein SufB {ECO:0000313|EMBL:KGI72826.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Iron-regulated ABC transporter membrane component SufB
L3_101_000M1_scaffold_414_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21333..22133)
DNA (801bp) protein (267aa)
FeS assembly ATPase SufC n=2 Tax=Collinsella RepID=A4EB24_9ACTN
FeS assembly ATPase SufC {ECO:0000313|EMBL:CDA35899.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Iron-regulated ABC transporter ATPase subunit SufC
L3_101_000M1_scaffold_414_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22356..22787
DNA (432bp) protein (144aa)
Transcriptional regulator, Rrf2 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB25_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72824.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
asnc family transcriptional regulator
L3_101_000M1_scaffold_414_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22927..24738
DNA (1812bp) protein (604aa)
Conserved domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z884_9ACTN
Conserved domain protein {ECO:0000313|EMBL:CDA35903.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_101_000M1_scaffold_414_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24941..26737
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH38_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35904.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_101_000M1_scaffold_414_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26762..27781)
DNA (1020bp) protein (340aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB31_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72819.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glycosyltransferase
L3_101_000M1_scaffold_414_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27952..29082)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNF8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35906.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_414_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29195..30298
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A443_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35907.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
family 2 glycosyl transferase
L3_101_000M1_scaffold_414_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30305..31345
DNA (1041bp) protein (347aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB33_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72817.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 2 glycosyl transferase
L3_101_000M1_scaffold_414_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31420..32538
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH46_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72816.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 2 glycosyl transferase
L3_101_000M1_scaffold_414_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32551..33618
DNA (1068bp) protein (356aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EBA39352.1}; EC=2.4.-.- {ECO:0000313|EMBL:EBA39352.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB35_9ACTN
family 2 glycosyl transferase
L3_101_000M1_scaffold_414_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33619..36105
DNA (2487bp) protein (829aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EBA39353.1}; EC=2.4.-.- {ECO:0000313|EMBL:EBA39353.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB36_9ACTN
family 2 glycosyl transferase
Displaying items 1-30 of 35 in total

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