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L3_101_000M1_scaffold_609

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_609_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(268..1200)
DNA (933bp) protein (311aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EBA38922.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EBA38922.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC29_9ACTN
L3_101_000M1_scaffold_609_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1275..1994)
DNA (720bp) protein (240aa)
Transcriptional regulator GntR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHL7_9ACTN
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA36029.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GntR family transcriptional regulator
L3_101_000M1_scaffold_609_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2301..3701
DNA (1401bp) protein (467aa)
Glycoside hydrolase family 1 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S6_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:KGI74297.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glycoside hydrolase family protein
L3_101_000M1_scaffold_609_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3821..5164
DNA (1344bp) protein (448aa)
PTS system, lactose/cellobiose family IIC subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S7_ATOPD
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system lactose/cellobiose family transporter subunit IIC
L3_101_000M1_scaffold_609_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5326..5628
DNA (303bp) protein (101aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N8X7_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KGI74295.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_101_000M1_scaffold_609_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5638..5970
DNA (333bp) protein (111aa)
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N8X6_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KGI74294.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphotransferase system PTS lactose/cellobiose-specific IIA subunit
L3_101_000M1_scaffold_609_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6212..7165
DNA (954bp) protein (318aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC31_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74293.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_101_000M1_scaffold_609_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7332..8255
DNA (924bp) protein (308aa)
inorganic diphosphatase (EC:3.6.1.1)
DHHA2 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC32_9ACTN
DHHA2 domain protein {ECO:0000313|EMBL:EBA38925.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_101_000M1_scaffold_609_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8523..9881
DNA (1359bp) protein (453aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC33_9ACTN
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NhaA family sodium/proton antiporter
L3_101_000M1_scaffold_609_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9968..10222)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC36_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38929.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_609_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10373..11677
DNA (1305bp) protein (435aa)
Aminotransferase class I/II n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4W5_9ACTN
Aminotransferase class I/II {ECO:0000313|EMBL:CDA36167.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator
L3_101_000M1_scaffold_609_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11744..12058
DNA (315bp) protein (105aa)
Anti-sigma factor antagonist n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP65_9ACTN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
anti-anti-sigma factor
L3_101_000M1_scaffold_609_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12167..12811
DNA (645bp) protein (215aa)
Twin arginine-targeting protein translocase, TatA/E family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC39_9ACTN
Twin arginine-targeting protein translocase, TatA/E family {ECO:0000313|EMBL:EBA38932.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
sec-independent translocation protein mttA/Hcf106
L3_101_000M1_scaffold_609_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12811..13602
DNA (792bp) protein (264aa)
Sec-independent protein translocase protein TatC n=2 Tax=Collinsella RepID=R5ZHW8_9ACTN
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Sec-independent protein translocase subunit TatC
L3_101_000M1_scaffold_609_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13609..13965
DNA (357bp) protein (119aa)
Hydrogenase nickel insertion protein HypA n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z9_9ACTN
Hydrogenase nickel insertion protein HypA {ECO:0000313|EMBL:KGI74285.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Zn finger protein HypA/HybF
L3_101_000M1_scaffold_609_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14021..14704
DNA (684bp) protein (228aa)
Hydrogenase accessory protein HypB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC42_9ACTN
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EBA38935.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hydrogenase nickel incorporation protein HypB
L3_101_000M1_scaffold_609_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14759..17353
DNA (2595bp) protein (865aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP61_9ACTN
L3_101_000M1_scaffold_609_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17498..18481)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC44_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38937.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_609_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18730..19413
DNA (684bp) protein (228aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECY1_9ACTN
L3_101_000M1_scaffold_609_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19415..20542
DNA (1128bp) protein (376aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
Putative DNA polymerase III, delta' subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECY2_9ACTN
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EBA38533.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_101_000M1_scaffold_609_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20533..22227
DNA (1695bp) protein (565aa)
PSP1 C-terminal domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECY3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74278.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PSP1 domain-containing protein
L3_101_000M1_scaffold_609_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22329..23135
DNA (807bp) protein (269aa)
Phosphoribosyl transferase domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3F7_9ACTN
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:CDA35667.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_101_000M1_scaffold_609_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23147..24259
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMV0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35666.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_609_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24774..26003
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECY6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38537.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
family 3 extracellular solute-binding protein
L3_101_000M1_scaffold_609_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26321..26905
DNA (585bp) protein (195aa)
Ribosomal subunit interface protein n=2 Tax=Collinsella RepID=A4ECY7_9ACTN
Ribosomal subunit interface protein {ECO:0000313|EMBL:EBA38538.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
30S ribosomal protein S30P; sigma 54 modulation protein
L3_101_000M1_scaffold_609_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26985..27938
DNA (954bp) protein (318aa)
EDD domain protein DegV family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7J6_9ACTN
EDD domain protein DegV family {ECO:0000313|EMBL:CDA35663.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
degV family protein
L3_101_000M1_scaffold_609_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28037..29116
DNA (1080bp) protein (360aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Phosphogluconate dehydrogenase (Decarboxylating) NAD binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3F3_9ACTN
Phosphogluconate dehydrogenase (Decarboxylating) NAD binding domain protein {ECO:0000313|EMBL:CDA35662.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_101_000M1_scaffold_609_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29122..29550
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECZ1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38541.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_609_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29566..30264
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECZ2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38542.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_101_000M1_scaffold_609_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30271..31356
DNA (1086bp) protein (362aa)
Putative isocitrate dehydrogenase NAD-dependent n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGI5_9ACTN
Putative isocitrate dehydrogenase NAD-dependent {ECO:0000313|EMBL:CDA35659.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
isocitrate dehydrogenase
Displaying items 1-30 of 31 in total

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