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L3_101_000M1_scaffold_927

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_927_1
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(151..1218)
DNA (1068bp) protein (356aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Lactobacillus ruminis (strain ATCC 27782 / RF3) RepID=G2SQC6_LACRR
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN77475.1}; TaxID=1069534 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis (strain ATCC 27782 / RF3).;"
L3_101_000M1_scaffold_927_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1218..1970)
DNA (753bp) protein (251aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB40_9ACTN
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_101_000M1_scaffold_927_3
Parascardovia denticolens, Parascardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1954..2775)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Parascardovia denticolens IPLA 20019 RepID=I8JB59_PARDN
Uncharacterized protein {ECO:0000313|EMBL:EIT89061.1}; TaxID=1193128 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Parascardovia.;" source="Parascardovia denticolens IPLA 20019.;"
hypothetical protein
L3_101_000M1_scaffold_927_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2768..3829)
DNA (1062bp) protein (354aa)
Glycosyl transferase, group 1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUM3_BIFLS
putative glycosyltransferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ACJ53169.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_101_000M1_scaffold_927_5
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3995..4834)
DNA (840bp) protein (280aa)
PEP-CTERM/exosortase 1-associated glycosyltransferase Daro_2409 family n=1 Tax=Clostridium sp. CAG:242 RepID=R6CZN4_9CLOT
PEP-CTERM/exosortase 1-associated glycosyltransferase Daro_2409 family {ECO:0000313|EMBL:CDA77076.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
glycosyl transferase family 2
L3_101_000M1_scaffold_927_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4835..5617)
DNA (783bp) protein (261aa)
Bacterial sugar transferase {ECO:0000313|EMBL:EEP44036.1}; EC=2.4.1.- {ECO:0000313|EMBL:EEP44036.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Bacterial sugar transferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB36_9ACTN
Sugar transferases involved in lipopolysaccharide synthesis
L3_101_000M1_scaffold_927_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5756..6271)
DNA (516bp) protein (172aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73382.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NusG antitermination factor
L3_101_000M1_scaffold_927_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7277..7924)
DNA (648bp) protein (216aa)
Thiamine diphosphokinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8X5_9ACTN
Thiamine pyrophosphokinase {ECO:0000313|EMBL:KGI73381.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
thiamine pyrophosphokinase
L3_101_000M1_scaffold_927_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7928..8617)
DNA (690bp) protein (230aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73380.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
thiamine pyrophosphokinase
L3_101_000M1_scaffold_927_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8949..11210
DNA (2262bp) protein (754aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I5_9ACTN
L3_101_000M1_scaffold_927_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11305..13731
DNA (2427bp) protein (809aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I6_9ACTN
L3_101_000M1_scaffold_927_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13864..14988
DNA (1125bp) protein (375aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
nucleotidyl transferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=2 Tax=Collinsella RepID=A4E6I7_9ACTN
L3_101_000M1_scaffold_927_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14993..16120
DNA (1128bp) protein (376aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EBA40347.1}; EC=2.7.7.27 {ECO:0000313|EMBL:EBA40347.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glucose-1-phosphate adenylyltransferase subunit GlgD (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I8_9ACTN
L3_101_000M1_scaffold_927_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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16210..18579
DNA (2370bp) protein (790aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8S3_9ACTN
L3_101_000M1_scaffold_927_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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18798..22094
DNA (3297bp) protein (1099aa)
4-alpha-glucanotransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHQ3_9ACTN
4-alpha-glucanotransferase {ECO:0000313|EMBL:CDA36074.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
4-alpha-glucanotransferase
L3_101_000M1_scaffold_927_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22183..22419
DNA (237bp) protein (79aa)
Putative regulatory protein (CxxC_CxxC_SSSS) n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB67_9ACTN
Putative regulatory protein (CxxC_CxxC_SSSS) {ECO:0000313|EMBL:CDA36075.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
FmdB family transcripitonal regulator
Displaying 16 items

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