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L3_101_000M1_scaffold_911

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_911_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..454
DNA (453bp) protein (151aa)
RNA polymerase sigma factor n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1X5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
putative RNA polymerase sigma factor
L3_101_000M1_scaffold_911_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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731..2956
DNA (2226bp) protein (742aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:CBK97994.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK97994.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA polymerase III, subunits gamma and tau n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3A1_9FIRM
L3_101_000M1_scaffold_911_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2938..3135
DNA (198bp) protein (66aa)
Nucleoid-associated protein FP2_03180 n=2 Tax=root RepID=D4K3A0_9FIRM
conserved hypothetical protein TIGR00103
Nucleoid-associated protein FP2_03180 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3151..3750
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K399_9FIRM
recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3866..4348
DNA (483bp) protein (161aa)
SsrA-binding protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K398_9FIRM
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4826..5932)
DNA (1107bp) protein (369aa)
Transposase and inactivated derivatives n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K397_9FIRM
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBK97990.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_7
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6070..6429
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UL83_RUMA7
protein of unknown function DUF891
Uncharacterized protein {ECO:0000313|EMBL:ADU24429.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_101_000M1_scaffold_911_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6426..6713
DNA (288bp) protein (96aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H790_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU96260.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, XRE family
L3_101_000M1_scaffold_911_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6908..7504)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K395_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97988.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7871..8896)
DNA (1026bp) protein (342aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphotransacetylase {ECO:0000313|EMBL:CBK97987.1}; EC=2.3.1.8 {ECO:0000313|EMBL:CBK97987.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphotransacetylase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K394_9FIRM
L3_101_000M1_scaffold_911_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9085..9651
DNA (567bp) protein (189aa)
uracil-DNA glycosylase, family 4 (EC:2.7.7.7)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:CBK97986.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK97986.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Uracil-DNA glycosylase, family 4 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K393_9FIRM
L3_101_000M1_scaffold_911_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10018..11109
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K392_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97985.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11361..13844
DNA (2484bp) protein (828aa)
Rad3-related DNA helicases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K391_9FIRM
Rad3-related DNA helicases
Rad3-related DNA helicases {ECO:0000313|EMBL:CBK97984.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14063..15037)
DNA (975bp) protein (325aa)
Ketopantoate reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K390_9FIRM
Ketopantoate reductase
Ketopantoate reductase {ECO:0000313|EMBL:CBK97983.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15084..15341)
DNA (258bp) protein (86aa)
Copper chaperone n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K389_9FIRM
Copper chaperone
Copper chaperone {ECO:0000313|EMBL:CBK97982.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15555..16103)
DNA (549bp) protein (183aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphodiesterase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4L8_9FIRM
phosphoesterase, MJ0936 family
L3_101_000M1_scaffold_911_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16463..17794
DNA (1332bp) protein (444aa)
Putative efflux protein, MATE family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K388_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK97981.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17830..18798)
DNA (969bp) protein (323aa)
Na/Pi-cotransporter n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K387_9FIRM
Na/Pi-cotransporter
Na/Pi-cotransporter {ECO:0000313|EMBL:CBK97980.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19088..20236)
DNA (1149bp) protein (383aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase {ECO:0000313|EMBL:CBK97979.1}; EC=1.1.1.77 {ECO:0000313|EMBL:CBK97979.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Lactaldehyde reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K386_9FIRM
L3_101_000M1_scaffold_911_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20456..21856)
DNA (1401bp) protein (467aa)
Amino acid carrier protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K383_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBK97976.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22055..23038
DNA (984bp) protein (328aa)
AAA domain (Dynein-related subfamily) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K382_9FIRM
AAA domain (dynein-related subfamily).
AAA domain (Dynein-related subfamily) {ECO:0000313|EMBL:CBK97975.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23056..24807
DNA (1752bp) protein (584aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K381_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97974.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_911_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25034..25657
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K380_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97973.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 23 items

View Taxonomy