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L3_101_000M1_scaffold_1055

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_000M1_scaffold_1055_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..247
DNA (246bp) protein (82aa)
MATE efflux family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBM8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EET61831.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative efflux protein, MATE family
L3_101_000M1_scaffold_1055_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(403..561)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95133.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_101_000M1_scaffold_1055_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1196..2515)
DNA (1320bp) protein (440aa)
Na+/H+ antiporter NhaD and related arsenite permeases n=2 Tax=root RepID=D4K0R6_9FIRM
Na+/H+ antiporter NhaD and related arsenite permeases
Na+/H+ antiporter NhaD and related arsenite permeases {ECO:0000313|EMBL:CBK99865.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2512..3246)
DNA (735bp) protein (245aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0R5_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK99864.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3236..4312)
DNA (1077bp) protein (359aa)
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK99863.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0R4_9FIRM
L3_101_000M1_scaffold_1055_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4485..5507
DNA (1023bp) protein (341aa)
Threonine aldolase (EC:4.1.2.5)
Threonine aldolase {ECO:0000313|EMBL:CBK99862.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CBK99862.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Threonine aldolase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0R3_9FIRM
L3_101_000M1_scaffold_1055_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5733..6245
DNA (513bp) protein (171aa)
PTS system IIA component, Glc family (TC 4.A.1) (EC:2.7.1.69)
PTS system IIA component, Glc family (TC 4.A.1) {ECO:0000313|EMBL:CBK99861.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBK99861.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
PTS system IIA component, Glc family (TC 4.A.1) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0R2_9FIRM
L3_101_000M1_scaffold_1055_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6293..6934)
DNA (642bp) protein (214aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0R1_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK99860.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7029..7964)
DNA (936bp) protein (312aa)
Putative GTPases (G3E family) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0R0_9FIRM
Putative GTPases (G3E family)
Putative GTPases (G3E family) {ECO:0000313|EMBL:CBK99859.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8092..8664)
DNA (573bp) protein (191aa)
Carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956, ECO:0000313|EMBL:CBK99858.1}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956, ECO:0000313|EMBL:CBK99858.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Carbonic anhydrase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q9_9FIRM
L3_101_000M1_scaffold_1055_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8757..10094)
DNA (1338bp) protein (446aa)
Citrate transporter, CitMHS family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q8_9FIRM
citrate transporter, CitMHS family
Citrate transporter, CitMHS family {ECO:0000313|EMBL:CBK99857.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10410..10991)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99856.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11180..13333)
DNA (2154bp) protein (718aa)
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q6_9FIRM
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain {ECO:0000313|EMBL:CBK99855.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain.
L3_101_000M1_scaffold_1055_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13505..14134
DNA (630bp) protein (210aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q7Z4_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC29109.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_101_000M1_scaffold_1055_15
unknown

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14253..14399
DNA (147bp) protein (49aa)

This feature has no annotations

L3_101_000M1_scaffold_1055_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14371..15939)
DNA (1569bp) protein (523aa)
citrate lyase, alpha subunit (EC:4.1.3.6)
Citrate lyase, alpha subunit {ECO:0000313|EMBL:CBK99852.1}; EC=4.1.3.6 {ECO:0000313|EMBL:CBK99852.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Citrate lyase, alpha subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q3_9FIRM
L3_101_000M1_scaffold_1055_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15942..16844)
DNA (903bp) protein (301aa)
Citrate lyase beta subunit (EC:4.1.3.6)
Citrate lyase beta subunit {ECO:0000313|EMBL:CBK99851.1}; EC=4.1.3.6 {ECO:0000313|EMBL:CBK99851.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Citrate lyase beta subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q2_9FIRM
L3_101_000M1_scaffold_1055_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16841..17140)
DNA (300bp) protein (100aa)
citrate lyase acyl carrier protein (EC:4.1.3.6)
Citrate lyase acyl carrier protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q1_9FIRM
Citrate lyase acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00805, ECO:0000313|EMBL:CBK99850.1}; Citrate lyase gamma chain {ECO:0000256|HAMAP-Rule:MF_00805}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17621..18490)
DNA (870bp) protein (290aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Q0_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99849.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_101_000M1_scaffold_1055_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18677..19546)
DNA (870bp) protein (290aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0P9_9FIRM
L3_101_000M1_scaffold_1055_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20003..21019
DNA (1017bp) protein (339aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0P7_9FIRM
Glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CBK99846.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 21 items

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