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L3_101_044G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_044G1_scaffold_55_1
unknown

Not on your lists

comp(148..282)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_101_044G1_scaffold_55_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(476..1198)
DNA (723bp) protein (241aa)
MgtC family protein n=2 Tax=Clostridium perfringens RepID=H7CT31_CLOPF
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:EIA18325.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_044G1_scaffold_55_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1499..2422)
DNA (924bp) protein (308aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Glutaminase n=4 Tax=Clostridium perfringens RepID=H7CT30_CLOPF
glutaminase
L3_101_044G1_scaffold_55_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2799..4004)
DNA (1206bp) protein (402aa)
Voltage-gated chloride channel family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7F6_CLOPF
voltage-gated chloride channel family protein
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EIA18323.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_044G1_scaffold_55_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4338..5000)
DNA (663bp) protein (221aa)
Isochorismatase family protein n=3 Tax=Clostridium perfringens RepID=H7CT27_CLOPF
Isochorismatase family protein {ECO:0000313|EMBL:EIA18321.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
isochorismatase
L3_101_044G1_scaffold_55_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5258..6358
DNA (1101bp) protein (367aa)
Permease n=5 Tax=Clostridium perfringens RepID=H7CT26_CLOPF
Permease {ECO:0000313|EMBL:EIA18320.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
permease
L3_101_044G1_scaffold_55_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6409..6861)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7F3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23783.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_101_044G1_scaffold_55_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7152..7898
DNA (747bp) protein (249aa)
DeoR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CT24_CLOPF
DeoR family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80292.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_101_044G1_scaffold_55_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7898..8818
DNA (921bp) protein (307aa)
fruK; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Tagatose-6-phosphate kinase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTM1_CLOP1
L3_101_044G1_scaffold_55_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8822..10714
DNA (1893bp) protein (631aa)
fruA; PTS system fructose-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, fructose-specific, IIABC component {ECO:0000313|EMBL:EDS80913.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS80913.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
PTS system, fructose-specific, IIABC component n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTM2_CLOP1
L3_101_044G1_scaffold_55_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10996..11994)
DNA (999bp) protein (333aa)
Phosphate transporter family protein n=9 Tax=Clostridium perfringens RepID=H7CT21_CLOPF
phosphate transporter family protein
Phosphate transporter family protein {ECO:0000313|EMBL:EDT13909.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_55_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11987..12619)
DNA (633bp) protein (211aa)
Phosphate transport regulator n=10 Tax=Clostridium perfringens RepID=H7CT20_CLOPF
hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:EIA18314.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_044G1_scaffold_55_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12904..13491)
DNA (588bp) protein (196aa)
CDP-alcohol phosphatidyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CT19_CLOPF
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EIA18313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_044G1_scaffold_55_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13654..14766)
DNA (1113bp) protein (371aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH33_CLOPF
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDS81064.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
iron-sulfur binding reductase
L3_101_044G1_scaffold_55_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14756..15451)
DNA (696bp) protein (232aa)
DedA family protein n=9 Tax=Clostridium perfringens RepID=H7CT17_CLOPF
DedA family protein
DedA family protein {ECO:0000313|EMBL:EDS80983.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_101_044G1_scaffold_55_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15797..16678)
DNA (882bp) protein (294aa)
ABC transporter, permease protein n=8 Tax=Clostridium perfringens RepID=H7CT16_CLOPF
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIA18310.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_044G1_scaffold_55_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16680..17606)
DNA (927bp) protein (309aa)
ABC transporter permease n=6 Tax=Clostridium perfringens RepID=H7CT15_CLOPF
ABC transporter, permease protein {ECO:0000313|EMBL:EDT13923.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter permease
L3_101_044G1_scaffold_55_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17685..19070)
DNA (1386bp) protein (462aa)
ABC transporter n=4 Tax=Clostridium perfringens RepID=H7CT14_CLOPF
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS81063.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter
L3_101_044G1_scaffold_55_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19223..20812)
DNA (1590bp) protein (530aa)
DNA-binding response regulator, AraC family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V665_CLOPF
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT70697.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
AraC family transcriptional regulator
L3_101_044G1_scaffold_55_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20825..22576)
DNA (1752bp) protein (584aa)
Sensor histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNI5_CLOPF
Sensor histidine kinase {ECO:0000313|EMBL:EIA18306.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
sensor histidine kinase
L3_101_044G1_scaffold_55_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22761..24965)
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH27_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80906.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_101_044G1_scaffold_55_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25258..25506)
DNA (249bp) protein (83aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CT10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13925.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_55_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25905..26312
DNA (408bp) protein (136aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CT08_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70518.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_101_044G1_scaffold_55_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26416..27408
DNA (993bp) protein (331aa)
Cell wall binding repeat domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTN6_CLOP1
cell wall binding repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80276.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_101_044G1_scaffold_55_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27535..28017)
DNA (483bp) protein (161aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000255|HAMAP-Rule:MF_00178};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Clostridium perfringens RepID=RISB_CLOP1
L3_101_044G1_scaffold_55_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28123..29322)
DNA (1200bp) protein (400aa)
ribA; riboflavin biosynthesis protein RibA (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTN8_CLOP1
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_101_044G1_scaffold_55_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29474..30094)
DNA (621bp) protein (207aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABG85559.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ABG85559.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Riboflavin synthase, alpha subunit n=2 Tax=Clostridium perfringens RepID=Q0TTN9_CLOP1
L3_101_044G1_scaffold_55_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30116..31198)
DNA (1083bp) protein (361aa)
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNJ6_CLOPF
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_101_044G1_scaffold_55_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31787..32497)
DNA (711bp) protein (237aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7G2_CLOPF
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDT23829.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
N-acetylmuramoyl-L-alanine amidase
L3_101_044G1_scaffold_55_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32823..34988
DNA (2166bp) protein (722aa)
Stage V sporulation protein D n=2 Tax=Clostridium perfringens RepID=Q0TTP2_CLOP1
spoVD; stage V sporulation protein D
Stage V sporulation protein D {ECO:0000313|EMBL:EDT23827.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 106 in total

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